Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_3142
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Entry
AHA_3142 CDS
T00424
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Pathway
aha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AHA_3142 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aha03400
]
AHA_3142 (ung)
Enzymes [BR:
aha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AHA_3142 (ung)
DNA repair and recombination proteins [BR:
aha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AHA_3142 (ung)
Prokaryotic type
AHA_3142 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Virulence_RhuM
Motif
Other DBs
NCBI-ProteinID:
ABK36154
UniProt:
A0KMZ1
LinkDB
All DBs
Position
complement(3555454..3556122)
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AA seq
222 aa
AA seq
DB search
MQTWTDVIGSEKEQDYFKATLATVRSEREAGKVIYPPATDVFNAFKLTELDQVKVVILGQ
DPYHGPNQAHGLCFSVLPGVRTPPSLVNIYKEMQRDLPGFVTPSHGFLESWAKQGVLLLN
TVLTVQAGQAHSHAHLGWETFTDRVIEQINASCQGVVFLLWGAHAQKKGRFIDRQRHHVL
SAPHPSPLSAHRGFIGCGHFSETNRLLSQQGMSPINWHSVCE
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacctggactgatgtaattggctccgagaaggagcaggactatttcaaggcgacc
ctggcgaccgtcaggagtgagcgggaggcgggcaaggtgatctatccgccagcgaccgac
gtgttcaatgccttcaagctgaccgagctggatcaggtcaaggtggtgatcctgggtcag
gacccctatcacggccccaatcaggcgcacggtctctgcttctcggtgttgccgggggtg
cgcacgcccccctcgctggtcaacatctacaaggagatgcagcgggatctgccgggtttt
gtcacacccagtcacggctttctggagtcctgggccaaacagggggtgctgctgctcaat
accgtgctgacggtccaggcgggccaggcccactcccatgcccatctgggttgggagacc
ttcaccgaccgggtcatcgagcagatcaatgccagctgtcagggagtggtcttcctgctg
tggggcgcccatgcccagaagaagggtcgcttcatcgacaggcagcgtcatcatgtgctg
agcgcgccgcatcccagcccgctctctgctcatcgcggcttcatcggctgcggccacttc
tccgaaaccaaccggctgctgagccagcaggggatgagccccatcaactggcactcggtc
tgcgagtga
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