Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_3250
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Entry
AHA_3250 CDS
T00424
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Pathway
aha03030
DNA replication
aha03430
Mismatch repair
aha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AHA_3250 (holA)
03430 Mismatch repair
AHA_3250 (holA)
03440 Homologous recombination
AHA_3250 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aha03032
]
AHA_3250 (holA)
03400 DNA repair and recombination proteins [BR:
aha03400
]
AHA_3250 (holA)
Enzymes [BR:
aha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AHA_3250 (holA)
DNA replication proteins [BR:
aha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AHA_3250 (holA)
DNA repair and recombination proteins [BR:
aha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AHA_3250 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
ABK37796
UniProt:
A0KN90
LinkDB
All DBs
Position
3666212..3667243
Genome browser
AA seq
343 aa
AA seq
DB search
MRIYPEQLADHLKAGLKPCYLIFGDEPLLKLEAIDAVRQVARKQGFDERHSFVVEQGLDW
NQVYDACQAMSLFSARQIIELELPAKVDKELAARISEIGKQLHPDLLLVLSGNRLNQTQM
KAAWFDKLSQSGTYVPVNHPEPRFFPRWMSARFQRFGLKALPDAVNFMCHSYEGNLLAAS
QEIEKLTLLSPPQPISVAYLQETIIRHAHFTPFQLIDTLLEGKVNRAQRILLALRAEGTE
PGMLAWALCRELEQLTELALAARAGQPLVEHFSRLRIWQSRQQLIQQALTRLPFAKLQQL
WQLMARLDDAQRRFDTEQAWLMLQTLALGFRDGTPLPLAGSDA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcggatttaccctgaacaactcgcggaccatctcaaggcagggctcaagccctgttat
ctcatttttggggacgagcccctgctcaagctggaagccatcgacgccgtgcgccaggtg
gcgcgcaaacagggcttcgatgagcgtcacagcttcgtggtggagcaagggctggactgg
aatcaggtctacgatgcctgccaggccatgagcctgttctcggcccgccagatcatcgag
ctggagctgccggccaaggtcgacaaggagttggccgcccgcatcagcgagatcggcaaa
cagctgcaccccgacctgctgctggtgctgagcggtaatcgcctcaaccagacccagatg
aaggcagcctggttcgacaagctgagccagagcggcacctatgtgccggtcaaccacccc
gagccccgcttctttccgcgctggatgagcgcccgcttccagcgcttcgggctgaaggcg
ctaccggatgcggtcaacttcatgtgccactcctacgagggcaacctgctggccgccagc
caggagatagagaagctgaccctgctctcgccgccccagcccatcagcgtcgcctatctg
caggagaccatcatccgccacgcccacttcaccccgttccagctcatcgacaccctgctg
gaagggaaggtgaaccgggcccagcgcatcctgctggccctgcgcgccgagggtaccgaa
cccggcatgctggcctgggccctgtgccgcgagctggagcagctcaccgagctggcgctg
gcggccagggccggtcagccgctggtggagcacttctcccgcctgcgcatctggcagagc
cgccagcagctcattcaacaggcgctgacccggctgcccttcgccaagctgcaacagttg
tggcagctgatggccaggctcgacgacgcccagcgtcgcttcgataccgagcaggcctgg
ctgatgttgcagaccctcgccctcggttttcgcgatggcacccccttgccgctggcggga
tctgacgcatga
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