Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_3957
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Entry
AHA_3957 CDS
T00424
Symbol
ssb
Name
(GenBank) single-strand binding protein
KO
K03111
single-strand DNA-binding protein
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Pathway
aha03030
DNA replication
aha03430
Mismatch repair
aha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AHA_3957 (ssb)
03430 Mismatch repair
AHA_3957 (ssb)
03440 Homologous recombination
AHA_3957 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aha03032
]
AHA_3957 (ssb)
03400 DNA repair and recombination proteins [BR:
aha03400
]
AHA_3957 (ssb)
03029 Mitochondrial biogenesis [BR:
aha03029
]
AHA_3957 (ssb)
DNA replication proteins [BR:
aha03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AHA_3957 (ssb)
DNA repair and recombination proteins [BR:
aha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
AHA_3957 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
AHA_3957 (ssb)
Mitochondrial biogenesis [BR:
aha03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
AHA_3957 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
DUF3127
Phage_attach
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABK39030
UniProt:
A0KQ40
LinkDB
All DBs
Position
4389006..4389584
Genome browser
AA seq
192 aa
AA seq
DB search
MASRGINKVILIGNLGQDPEVRYMPSGGAVTNITLATSDTWRDKQTGEQKERTEWHRVVF
MGKLAEVAGEYLKKGSQVYVEGKLQTRKWQDQSGQERYTTEVLVDGFSGVMQMLGGRPQG
GAGQGMGGQSQGNWGQQQGMQSQQPMNQARPAQAPQQNMQQQGGYARPAQQPQSAPPVYN
EPPMDFDDDIPF
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgaggcatcaataaagtcattctgatcggtaacctggggcaagacccggaa
gtgcgctacatgccgagcggcggtgccgtgaccaatatcaccctggccacctccgacacc
tggcgcgacaagcagaccggtgagcagaaagagcgtaccgagtggcaccgcgttgtcttc
atgggcaagctggccgaagtggctggcgagtacctgaagaaaggttcccaagtctatgtt
gaaggcaagctgcagacccgcaagtggcaggatcaaagcggccaggagcgttacaccacc
gaagtgctggtcgatggcttcagcggcgtgatgcagatgctgggtggccgtccgcaaggc
ggcgccggccagggcatgggtggccagtctcagggtaactggggtcagcagcagggcatg
cagtcccaacagccgatgaaccaggcgcgtcctgcccaggctccgcagcagaacatgcag
caacagggcggctatgctcgtccggcccagcagccgcagtctgcaccgccggtgtacaat
gagccgccgatggacttcgacgacgacattccgttctaa
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