Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_3976
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Entry
AHA_3976 CDS
T00424
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Pathway
aha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AHA_3976 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aha03400
]
AHA_3976 (recC)
Enzymes [BR:
aha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AHA_3976 (recC)
DNA repair and recombination proteins [BR:
aha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AHA_3976 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABK38518
UniProt:
A0KQ59
LinkDB
All DBs
Position
complement(4410716..4414066)
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AA seq
1116 aa
AA seq
DB search
MFTLYHSNQLDLLKELLVSRIRQAPLSHPFDREQILVQSPGMAQWLKLELAKAFGIAANI
DFPLPASFIWEMFTRVLADVPRQSPYNKGAMSWQLMTILPALLDRPAFAPLAAYLGGDDA
DPAKDPEQVRLWQLCQKVADLFDQYLVYRPDWIARWEQGEGLSQELAGVSGQDWQPELWR
ELVARTLALSPSGYHRANLYEEFIHELQRTATLPGKLPQRVFVFGISALPPRYVEALLAL
GSRPEVEVHLFVTNPCRYYWGDLLDRKTLARLENKLKPGTDIETLQGPANPLLASMGKLG
RDYLHQLMELEVPQIEAFVDIEEMDGKGNIKLLHAIQKDVLELAERGAGQFDLDASHHKS
PLDPADGSLQIHACHGPMRELEVLHDRLLALFEQDTSLTPKDVVVMMPDVNSYGPYIQAV
FGARGQIPFAVSDRAASQESPLLQSFLALLRLPNARFGAGELLAILEVPAVLRRFELDDE
EFNQLRVWVQETGIRWGLDDGYPERFDLPPLSGNSWLFGLRRMLLGFAMGDGEPVAGILP
YADIEGQQGLALGKLAWFVDSLAEFLPRLQQAQPLGEWVACLNALLERFYLADEDEERQL
QLIRSQLADWLAQLGEARFEQPISADLLQDYLGSVLGESRSSQRFLAGQVNFCTLMPMRS
IPFKQVCLLGMNDGVYPRTLPPMGFDLMAVAGRRGDRSRRDDDRYLFLEALLSAQQGLYI
SYQGFSAQDNSDKVPSVLLAELIDYVRQGFVLAGDEQLDDESSGKRLLAHLITQHPLTPY
SHAYFYPAAGSGLFTYAADWLPALHPQRGAANFQSGELPLPPEWGKEQGLELAELLRFYR
QPARYFLNRRLKVWFELNEANIEESEPFELDGLQHYQLKDLLLDAHLAQGDSVVRRERLQ
LTGLLPQGWFGSLLLEDLDEQMGKLADRLRPWVAANEADKQAVEVDIALAQGQLQGWLDT
QKGRLLVVKPGSFNGKDLLLGWIQHLCLSLSDAPGDTLLFDAKQSLRLARLPADEARPKL
AALVALWMQGMKRPLPFFPSTAWDWLKAIEKDPEKPEAADKAALTRFNGGYMAKGEGEDA
YVARCFPELDEAVLAQLQALAREHLTPLLKSLEELQ
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctctaccactccaatcagctggacctgctcaaagagctgctggtgagccgc
atccggcaggcccctctctctcaccccttcgatcgggagcagatcctggtgcagagtccg
ggtatggcccagtggctcaagctggagctggccaaggccttcggcatcgccgccaatatc
gactttccgctgcccgccagctttatctgggagatgttcacccgggtgctggcggatgtg
ccgcgccagagcccctacaacaagggcgccatgagctggcagctgatgaccattctgccc
gccctgctcgatcgcccggcctttgcgccgctggccgcctatctgggcggggatgacgca
gatcctgccaaggatcccgagcaggtgcggctgtggcagctctgccagaaggtggcggat
ctctttgaccagtatctggtctaccggccggactggatcgcccgctgggaacagggggag
gggttgagccaggagctggcgggagtgagcgggcaggattggcagcccgagctgtggcgc
gagctggtggcccgcaccctggcgctctctccgagcggctaccaccgtgccaacctctac
gaggagttcatccacgagctgcagcgtactgccacgctgccgggcaagctgccgcagcgg
gtgttcgtgtttggcatctcggcgctgccgccgcgctatgtggaggcgctgctggccctc
ggcagtcggccggaggtggaggtgcacctgttcgtcaccaacccttgccgttactactgg
ggcgacctgctcgatcgcaagacgttggcgcggctggagaacaagctcaaacccggcacc
gatatcgagaccctgcagggacccgccaacccgctgcttgcctccatgggcaagctgggg
cgcgactacctgcatcagctgatggaattggaggtgccgcaaatcgaggcctttgtcgat
atcgaggagatggatggcaagggcaatatcaagctgctgcacgccatccagaaggatgtg
ctggagctggccgaacggggcgccggccagtttgatctcgacgccagccaccacaagagc
ccgctcgatccggcggatggctccctgcagatccacgcctgccacggcccgatgcgcgag
ctcgaggtgctgcacgaccggctgctggcgctgttcgagcaggacacctccctcaccccg
aaagacgtggtggtgatgatgccggacgtgaacagctacggcccctacattcaggcggtg
ttcggcgcgcgcggccagatcccgtttgcggtgtcggatcgggcggcgagccaggagagc
ccgctgctgcagagcttcctcgccctgctcaggctgcccaacgcccgcttcggcgcgggg
gagctgctcgccattctcgaggtgcccgccgtgctgcgccgcttcgagctggatgacgag
gagttcaatcagctgcgagtctgggtgcaggagaccggcatccgctgggggctggatgac
ggctaccccgagcgcttcgatctgccgcccctctctggcaacagctggctgttcggcctg
cgccgcatgctgctcggctttgccatgggggacggcgagccggtggcaggcatcctgccc
tatgcagacatcgagggtcagcaggggttggcgctcggcaagctcgcctggttcgtcgat
tcgctggccgaatttttaccccgcctgcaacaggcgcagccgctgggggagtgggtcgcc
tgcctcaacgcgctgctggagcgcttctatctggccgacgaggatgaagagcgtcagctg
cagctcattcgcagccagctggccgactggcttgcccagcttggcgaagcccgcttcgag
cagcccatcagtgccgacctgttgcaggattatctcggcagcgtgctgggggagtcccgc
tccagccagcgcttcctcgccggtcaggtcaacttctgcaccctgatgccgatgcgctcc
attcccttcaagcaggtctgcctgctcggcatgaacgacggcgtctacccgcgcaccctg
ccacccatggggtttgacctgatggcggtggcgggccggcggggggatcgctcccgtcgc
gatgacgaccgctacctgttcctcgaggcgctgctcagcgcccagcaggggctctacatc
agctatcagggcttcagcgcccaggacaacagcgacaaggtgccctcggtgctgctggcc
gaactcatcgactatgtgcggcagggtttcgtgctggcgggggatgagcagctcgatgac
gagagctccggcaaacggctgctggcgcacctgatcacccagcatccgctcaccccctac
agccacgcctacttctatccggcggcgggctctggcctctttacctatgccgccgactgg
ctgccggccctccatccgcagcgcggcgcggccaacttccagagtggcgagctgccctta
cctcccgaatggggcaaggagcaggggctggagctggcggagctgctgcgcttctatcgc
cagccagcccgctactttctcaaccgccgcctcaaggtgtggttcgagctgaacgaagcc
aacatcgaggagagcgaaccgttcgagctggacggcctgcaacattatcagctgaaagac
ctgctgctcgatgctcacctggcacagggggacagtgtcgtgcgtcgcgagcggctgcag
ctcaccggcctgctgccgcaagggtggttcggcagcctgctgctggaggatctggacgag
cagatgggcaagctggcggatcggctgcggccctgggtggcggccaatgaggcggataaa
caggcggtggaggtcgatatcgcgctggcccagggtcagctgcaagggtggctcgacacc
cagaaggggcgcttgctggtggtgaaacccggcagcttcaacggcaaggatctgttgctg
ggctggatccagcacctctgcctttccttgagcgatgcccccggcgacaccctgctgttt
gacgccaagcagagtctgcggctggccaggctcccggctgacgaggcgcggcccaagctg
gcggcgttggtggcgctctggatgcaggggatgaagcggccgctgccctttttcccgagc
accgcctgggactggctcaaggcgatcgagaaggatccggagaaaccggaggcggccgac
aaggcggccctcacccgcttcaacggtggctacatggccaagggggagggggaagacgcc
tatgtcgcccgctgtttcccggaactcgacgaggccgtgctggcccagttgcaggcgctg
gcccgtgaacacctgaccccgctgctcaagagcctggaggagttgcaataa
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