Anoxybacterium hadale: FRZ06_03170
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Entry
FRZ06_03170 CDS
T10883
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ahad Anoxybacterium hadale
Pathway
ahad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRZ06_03170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahad03019
]
FRZ06_03170
03009 Ribosome biogenesis [BR:
ahad03009
]
FRZ06_03170
Enzymes [BR:
ahad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FRZ06_03170
Messenger RNA biogenesis [BR:
ahad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FRZ06_03170
Ribosome biogenesis [BR:
ahad03009
]
Prokaryotic type
rRNA helicases
FRZ06_03170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
CMS1
PH_UBFD1_C
AAA_22
Cas3-like_C_2
AAA_19
NAT10_TcmA_helicase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QOX62430
UniProt:
A0ACD1A7S3
LinkDB
All DBs
Position
complement(752867..754498)
Genome browser
AA seq
543 aa
AA seq
DB search
MENILFKDLNLSNDVQKALSAMGFEEATPIQTKAIPPIFEGKDIIGMAQTGTGKTCAFGI
PAVEMLDPNVSGVQVLILSPTRELAIQISEELKNVCKFKRGVKILPIYGGQSIERQIQAL
KGKPQIIIGTPGRVMDHMRRHTLKLANLKMIILDEADEMLNMGFREDIDTILAQVPEERQ
TLLFSATMASEIMDLTKLYQKEPMLIKTVHKELTIPSIEQYYLEVRDSSKPELLCRMIDA
KNIKLGLVFCNTKKRVDDLTIALQTRGYSAEALHGDMKQSERDRVMNKFRKGMIEILVAT
DVAARGIDVNNIEAVFNYDIPNDEEYYVHRIGRTGRAGKTGVSYSFIFGRDIYKLKDIQR
YTKSEILPMKPPTITDVEEVKLEASIGKVLSLLESPERYTKYHSTIEKILAESADATTLD
VAGALFSMAFEELDNRNYEYSDLDDDHTRYQKGGMTRLFMNIGTMDHIQPKHIVQSIAAK
TSLAGKLIGEIDIHKNFTFVEIPSEFADEVMDSMRNYTHRGRKVQIEKAAKRQGPKNKPN
RRR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacatattattcaaagatctaaatctatcaaatgatgtgcaaaaggcactcagt
gctatggggtttgaagaagctactcccatacaaacaaaggcaattccgcctattttcgaa
ggtaaagatattatcggaatggcacagactggtaccggaaaaacctgcgcatttggcatt
ccggcagtagaaatgcttgatccgaatgtaagcggtgtacaggtactcattttgagtcct
acaagggaactggcgatccagatatccgaagaattgaagaacgtatgtaaatttaaaaga
ggcgtaaaaatactgccaatttatggcggtcagtcaatcgaacggcaaatccaggccctg
aaaggaaaaccgcagattataatcggcactcctggaagagtcatggatcatatgagaaga
cataccctcaagcttgcaaacttaaaaatgattattcttgatgaagcagacgaaatgctc
aatatgggcttccgtgaagatatcgataccatccttgctcaggtaccagaagagagacag
acgctgttgttctctgctaccatggcatcggaaattatggatttgaccaagctttatcaa
aaagagcccatgttgatcaaaacagttcataaggagcttacaatacccagtattgaacag
tactatctggaagtcagggatagctccaaaccggaattgctctgccgcatgatcgacgcc
aaaaatatcaagcttggtttggtattctgtaatacaaagaaacgtgttgacgatcttacc
attgctcttcagacgcgaggttactccgctgaagcacttcatggcgatatgaagcagtca
gaacgagatcgagtaatgaataaattcagaaaaggcatgatcgaaatccttgtggcaaca
gatgttgcggcaagaggcatcgatgtaaacaatattgaagcggttttcaattacgatatt
cccaatgacgaggagtattacgtacacagaatcggccgtacaggacgtgcaggaaaaaca
ggtgtttcctactcctttatctttggccgtgatatttacaagctgaaggacatccaacga
tatacgaagtctgaaattcttccaatgaaaccgcctacgatcacagacgtggaagaggtt
aagctagaagcctccatcggaaaggtgctttcactcctggaatcaccggaacgatataca
aaatatcattccactattgaaaaaatcctggccgaatcagcggatgcgacaacccttgat
gttgccggagctcttttcagcatggcttttgaagaactggacaacagaaactatgagtat
tctgatttggatgacgaccacaccagatatcaaaagggaggcatgacacgccttttcatg
aatatcggaaccatggatcacatccagccaaaacacatcgtgcagagcatcgccgcaaag
acctctcttgccggcaagctgatcggtgaaatcgatattcataaaaactttacgttcgtg
gaaatcccatctgaatttgctgacgaagttatggattctatgagaaactacacccaccgc
ggcagaaaggtacagatcgaaaaagcggcaaagcgtcagggtccgaaaaacaaacccaat
cgtagaagataa
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