Anoxybacterium hadale: FRZ06_04020
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Entry
FRZ06_04020 CDS
T10883
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ahad Anoxybacterium hadale
Brite
KEGG Orthology (KO) [BR:
ahad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahad03016
]
FRZ06_04020 (truB)
Enzymes [BR:
ahad01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FRZ06_04020 (truB)
Transfer RNA biogenesis [BR:
ahad03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FRZ06_04020 (truB)
Prokaryotic type
FRZ06_04020 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QOX62569
LinkDB
All DBs
Position
916248..917300
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AA seq
350 aa
AA seq
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MIKDGIINLLKPAGMTSHDGVQFLRRLTGIKRIGHTGTLDPMAVGVLPLCIGSAARITEY
LDLDYKKYRCEMQLGLETDTQDIWGTAIQDRREAGFPERAKVEEALFRLRGVIYQYPPGY
SAVRVNGKRLYEYARQGEEVEIKARKVEIKDLTVISYDSDRGRAVFDVTCSKGTYIRTIC
HDTGTFLGCGAVMSSLIRTASGAFELNHTVTLEELKDNGAEPYLLPPDFPLVHFGQATVS
ADRGKWFANGGHLRMSEIDIIREPEFKNPSSGQEGVRDIREEYRSAYNIYLKDTSSSDQN
PGTFLGVAFYSPQYKKLVGDKIFLSDRAIFDSTEASEAVEKTVQGRGDSE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagacggaattattaatttactgaagcctgcgggaatgacctcccatgatggc
gttcagtttctcagacgccttactgggattaaaagaataggacatactggtacgctggat
ccaatggctgtcggcgtacttcctttatgtattggcagtgcagctcggattactgaatat
ctggatctggattacaagaaataccgctgcgaaatgcaattgggattggaaacagacacc
caggacatttggggcaccgctatacaggatagacgagaagctggtttccccgaaagagca
aaagtagaagaagcacttttccggctacgtggagtgatttatcaatatccccccgggtac
tctgctgtaagagtaaatggcaagcggctttatgaatatgcaagacagggagaagaagtc
gaaatcaaggccagaaaagttgaaataaaagatctcacggtgatatcgtatgattcggac
agagggcgtgcagtctttgatgttacttgttcaaaaggcacctacataaggacaatctgt
cacgatacaggtacatttctgggctgcggagcagtgatgagcagtttgattcgaacggcc
agcggtgcatttgaattgaatcatacagtgactttagaagaactaaaagataacggcgcg
gaaccttacctgctgcctcctgattttccgctggttcattttggccaggcaacggtatca
gctgacagaggaaaatggtttgcgaacggtggtcatctacgaatgtccgagatcgatatc
atacgggaaccggaatttaaaaatccgagctccggccaggaaggtgtacgggatattcgg
gaagaataccgaagcgcctataatatttatttgaaagacacatccagcagcgaccaaaat
ccgggaacctttctaggcgttgcattctatagcccccaatacaaaaaactcgtcggcgac
aagatttttctcagcgacagagctatctttgatagcactgaagcgagcgaagcggtagaa
aaaacagtccaggggcgtggagactcagaataa
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