Anoxybacterium hadale: FRZ06_13405
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Entry
FRZ06_13405 CDS
T10883
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ahad Anoxybacterium hadale
Brite
KEGG Orthology (KO) [BR:
ahad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahad03019
]
FRZ06_13405
Messenger RNA biogenesis [BR:
ahad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FRZ06_13405
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Ortholog
Paralog
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
MmlI
Motif
Other DBs
NCBI-ProteinID:
QOX64266
UniProt:
A0A7S7J1W1
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All DBs
Position
complement(3002249..3003211)
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AA seq
320 aa
AA seq
DB search
MKEFYIGQLRTDDEIQDFFMVKTIAIKIGSNKKQYLDLFLCDKTGEITGKKWDVSDPELP
ALNEIADGDFVKVKANVTEWNGMRQLRVQKIRKSVPEDHLELADYIKAAPEKADDMYLFL
LEKAEGMTDHDLRSLCVRVLEDNQEKLMYYPAAAKNHHAELSGLLYHVKRMLMTAERVCE
VYTNLNKDLVMAGVILHDMEKINEIEADTLGMASGYSFEGQMLGHLIQGIKTIDRLAEEL
GIGKEKAVMLEHMILSHHYEPEFGSPKKPLFPEAEILHYLDMIDARMYDMHEALESTTEG
DFSDRVWTLDNRRLYKPTSF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattttacataggccagctcaggaccgatgatgaaatacaggatttttttatg
gtgaaaaccatagctataaaaatcggatcaaataaaaaacaatatctggatctgttcctg
tgcgataaaacaggagaaataaccgggaaaaaatgggatgtttcagatccggagcttcct
gcgctcaatgaaattgcagacggcgatttcgtcaaagtaaaggcaaacgtaacggaatgg
aacggaatgaggcagctcagggtccaaaaaattagaaaatcagtgccagaagatcatctg
gaactggcggattatatcaaagcggcaccggagaaagctgatgacatgtacctgttcctg
ctggaaaaggcagagggaatgaccgatcatgatctgcgcagcctttgcgtccgcgtcctg
gaagacaatcaggaaaagctcatgtactacccggcggcagcaaaaaatcatcacgctgag
ctttcgggactgctgtaccatgttaagcgaatgctgatgactgcggagagagtttgtgag
gtttataccaatctgaataaggatcttgtcatggcaggtgtgatcctccacgacatggaa
aaaattaatgaaatcgaggcggacactctgggtatggcttctggttactcctttgaggga
cagatgctgggccacttgattcagggaatcaaaaccatcgatcggctggcagaggaactt
ggaatcggaaaagaaaaggccgtcatgctagagcatatgatcctttctcatcactacgag
ccggaattcggaagcccgaaaaaaccccttttccctgaagcggaaatcctacactatctg
gatatgatcgacgcaaggatgtatgacatgcatgaggcgctggaatcaacaacagaaggt
gacttctctgacagagtatggacgttggacaacagaaggctttacaagcccacctcattc
taa
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