Anoxybacterium hadale: FRZ06_18195
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Entry
FRZ06_18195 CDS
T10883
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ahad Anoxybacterium hadale
Pathway
ahad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRZ06_18195 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahad03019
]
FRZ06_18195 (recQ)
03400 DNA repair and recombination proteins [BR:
ahad03400
]
FRZ06_18195 (recQ)
Enzymes [BR:
ahad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FRZ06_18195 (recQ)
Messenger RNA biogenesis [BR:
ahad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FRZ06_18195 (recQ)
DNA repair and recombination proteins [BR:
ahad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FRZ06_18195 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RQC
HRDC
RecQ_Zn_bind
Helicase_Sgs1
DUF3987
ResIII
Motif
Other DBs
NCBI-ProteinID:
QOX65139
LinkDB
All DBs
Position
4148196..4150058
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AA seq
620 aa
AA seq
DB search
MDKHTILKNIYGYDSFRTGQEDLIDGAISGRDVLGIMPTGAGKSICFQVPALSFEGITIV
ISPLISLMKDQVMALVDVGVRAAYINSSLTEGQIRKVMENARMGVYKIIYVAPERLLTDS
FLSLVGALEISMIAIDEAHCISQWGQDFRPSYLKVTDFIDMLPARPVIAAYTATATKVVK
EDIVCMLGLQNPTVVVTGYDRKNLYFSVKKPQSKMNALLDYLKENGDKSGIIYCNTRKAV
EEVQEELFGRGYPVTRYHAGLSDAERKENQEAFINDSTPVMVATNAFGMGIDKSNVRYVI
HYNMPKDIESYYQEAGRAGRDGEPAECILYYSGQDVRINEFLIDKQMERENEELDNEEKE
LISERDRERLRKMTYYCFSNECLRDYILRYFGEYGNSSCGNCENCLTEYEDIDITSDAVS
IISVVHTSGQRYGMNSILDAVHGTDNAKVRQFRLNENPGFGALRSRTIIRLRQIANHLLV
TGYLHLTADQYPVLKVTKQGMEFLRQEIPTEPILLKLAKKQEEAPAAKKKTSKGGGGSEA
KYPELFEQLRKRRYEIAQKEHKPPYIIFSDKALKEMSSYLPTTEKTMLEINGVGSSKLEK
YGIEFIGLIKDYMREHKLKS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
ttggacaagcatacaattttgaaaaatatatatgggtacgattccttccgtacgggacag
gaagacctgattgacggtgcgatttccgggagggacgtcctcggaatcatgcccaccgga
gctggaaagtccatttgctttcaggtaccggcattgtcttttgaaggaattaccattgtc
atttcaccgctgatttcactcatgaaagatcaggtcatggcactggtagacgttggggtc
cgtgcagcatacatcaacagttcgctgacagaaggccagatccggaaggtgatggagaat
gcacgcatgggagtatataagatcatttatgtggcgccggaacgtttgctgacggattct
tttttatcccttgtgggtgcattggaaatttctatgattgcaattgatgaagctcattgt
atttcccagtggggacaggatttccggccaagctatctgaaagtcaccgattttattgat
atgctgcccgcaagaccggttatcgcagcttatacagctacggcaacgaaagtggtgaaa
gaggacattgtctgtatgctggggctgcaaaatcctactgtggttgtaaccggatatgat
cgaaaaaacctatacttttccgtgaagaagccccagagtaagatgaacgcactccttgat
tacctgaaggagaatggggataaaagcggcattatctattgcaataccagaaaagcggtg
gaagaggttcaggaagaattgttcggaaggggataccccgtcacgaggtaccatgcaggc
ttatccgatgccgagcgaaaagaaaatcaggaagcatttatcaacgacagcacccctgtt
atggtggcaaccaacgcctttggtatggggattgataaatccaacgtaagatatgtcatt
cattataatatgccaaaggacattgagagctattatcaggaggctgggcgtgccggaaga
gacggagaaccagcggaatgcatattgtattactccgggcaggatgtaaggatcaacgag
ttcctcatcgacaaacagatggaacgggaaaatgaagagctggacaatgaggaaaaggaa
cttattagtgagcgggatcgggagaggctccgcaaaatgacgtactattgcttttccaat
gagtgcctgcgggattacattctgcgctatttcggcgaatacggaaacagcagctgcgga
aactgtgaaaactgccttacagaatatgaggatattgacatcacctcggatgcagtgagc
atcatcagtgtggtacatacaagcggtcagaggtatggaatgaattcaatactggatgcg
gttcacggaacagataatgcaaaggtgaggcagttccggctcaatgagaatcccggattc
ggagcattgcggagcagaaccattatcagactgcggcagattgcgaaccatctgctggta
acaggttatctgcatctgaccgcagaccaatatcctgtattaaaggtaacgaagcaggga
atggaattccttcggcaggaaattcctacagaaccaatccttctaaagctggcgaagaag
caggaggaagcaccagccgctaagaaaaagacatcaaaaggaggcggtggaagcgaagca
aaatatcccgagctgtttgaacagcttcgcaagcggagatacgaaattgcgcaaaaagag
cataagcctccttatatcattttttcagacaaggcattaaaggaaatgagctcataccta
cccaccaccgagaaaaccatgctggagatcaatggggttgggagcagtaaactggagaag
tatggaatcgaatttatagggctgatcaaagattatatgagagagcataagcttaagtct
taa
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