Actinospongicola halichondriae: AB8619_02135
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Entry
AB8619_02135 CDS
T11204
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ahai Actinospongicola halichondriae
Pathway
ahai00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ahai00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AB8619_02135 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ahai01007
]
AB8619_02135 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahai03016
]
AB8619_02135 (lysS)
Enzymes [BR:
ahai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
AB8619_02135 (lysS)
Amino acid related enzymes [BR:
ahai01007
]
Aminoacyl-tRNA synthetase
Class II (A)
AB8619_02135 (lysS)
Transfer RNA biogenesis [BR:
ahai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AB8619_02135 (lysS)
Prokaryotic type
Other AARSs
AB8619_02135 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
TUG-UBL1
Motif
Other DBs
NCBI-ProteinID:
XQO38341
LinkDB
All DBs
Position
complement(394127..395536)
Genome browser
AA seq
469 aa
AA seq
DB search
MIFDPPYRLDVDARVASLIAEYAGLEDGEETERVVTIAGRVMLLRDQGKLAFATLREGDG
SEIQLFALSKVLDGYDEFVKLNLGDWVGATGTVVKTRRGELSVKITSFVHLAEARRGFGD
KFHGINDTDIRYRQRYADLWANPESAVVLRTRSRIMSLTRRWLEDREFVEVETPVLQHVA
SGAAATPFTTHHNALDVDLKLRIAPELFLKRLVVGGFERVFEIGRVFRNEGISTRHNPEF
TMLELYQAYADYADIMTLVEDLVAHLAIELHGTTTLTYGDRELDLSTPWRRASMVELIED
SIGVRLDVNQPIDDVRKVAVEHDVEIEESWGTGKLILEIYEKTTESSLWGPIFVTDYPEE
VSPLSRSHRELPGVTERFEAIVAGRELCNAFSELTDPDVQRARFEDQVRQHDAGDHEAMP
LDEDYLRAMEYGLPPTGGLGIGMDRLVMLLTDTPSIRDVVLFPTLRPEQ
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcgaccctccctaccgcctcgacgtcgatgcccgggtggcatcgctgatcgcc
gagtacgccggtctcgaggacggcgaagaaaccgagcgcgtcgtgaccatcgccggtcgc
gtcatgctcctgcgcgaccagggcaagctggccttcgccaccctccgcgagggcgacggc
tccgagatccagctcttcgcgctgtcgaaggtgctcgacgggtacgacgagttcgtgaag
ctcaacctcggcgactgggtcggcgcgaccggcaccgtggtcaagacccgtcggggcgag
ctctcggtgaagatcacgtcgttcgtccacctggccgaggcccgacgcggtttcggcgac
aagttccacggcatcaacgacaccgacatccgctaccggcagcgctacgccgacctgtgg
gccaaccccgagtcggccgtcgtgctccgtacccggtcgcggatcatgagcctgacccga
cggtggctcgaggaccgcgagttcgtcgaggtcgagacgcccgtgctccagcacgtggcc
agtggcgctgccgcaacaccgttcaccacgcaccacaacgccctcgacgtcgacctcaag
ctgcgcatcgctcccgaactgttcctcaagcgcctcgtcgtcgggggtttcgagcgggtg
ttcgagatcggacgggtgttccgcaacgagggcatctcgacccgacacaaccccgagttc
acgatgctcgagctgtaccaggcctatgccgactacgccgacatcatgaccctggtcgag
gacctggtcgctcacctggcgatcgagctccacgggaccaccacgctcacctacggcgac
cgcgagctcgacctctcgacgccgtggcgacgggcctcgatggtggagctgatcgaggac
tcgatcggtgtgcgcctcgacgtgaaccagccgatcgacgacgtccgcaaggtcgccgtc
gaacacgacgtcgagatcgaggagtcgtggggaacgggcaagctgatcctcgagatctac
gagaagacgaccgagtcctcgctgtgggggccgatcttcgtgaccgactaccccgaggag
gtctcgcccctctcgcgatcgcatcgtgagctgcccggcgtgaccgagcgtttcgaggcc
atcgtcgccggacgtgaactctgcaacgccttctcggagctcaccgaccccgacgtgcaa
cgagcccgcttcgaggaccaggtccgccagcacgacgccggcgaccacgaggccatgccg
ctcgacgaggactacctccgggcgatggagtacggccttccgcccaccggcggcctcggc
atcggcatggaccgtctcgtgatgctgctcaccgacacgccgtcgatccgcgacgtcgtg
ctcttccccaccctgcgccccgagcagtag
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