Actinospongicola halichondriae: AB8619_05375
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Entry
AB8619_05375 CDS
T11204
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ahai Actinospongicola halichondriae
Pathway
ahai02024
Quorum sensing
ahai03060
Protein export
ahai03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ahai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AB8619_05375 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AB8619_05375 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB8619_05375 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ahai02044
]
AB8619_05375 (ffh)
Enzymes [BR:
ahai01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
AB8619_05375 (ffh)
Secretion system [BR:
ahai02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AB8619_05375 (ffh)
Eukaryotic Sec-SRP protein
AB8619_05375 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
nSTAND3
AAA_33
Thymidylate_kin
AAA_31
APS_kinase
cobW
AAA_30
6PF2K
ArsA_ATPase
ATP_bind_1
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
XQO38963
LinkDB
All DBs
Position
1054941..1056380
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AA seq
479 aa
AA seq
DB search
MFEALSDRFETIFSGIRGKGKLREADVDEAMREIRLALLEADVNFTVVKNLIARIRERSI
GTEVSQALNPGQQVVKIVNEELVESLGGETIKISYASKPPTVVLMAGLQGSGKTTNSAKL
ARWFKSQGRNPLLVGADLQRPAAVQQLRTLAGQIDVSVFSASDEIVASGTGDPVAVAKDC
IDEARRLGKDVVIVDTAGRLAIDAELMEQVRQISEATSPDYTFLVVDAMTGQDAVTVAEN
FNETLALDGVILTKLDGDARGGAALSVKEVVGKPIAFASTGEKLDDFDLFHPDRLAGRIL
GMGDVLTLIEKAEEVFEEKEAEAAAQKLMDGHFTFDDFLEQMQQVKKMGSISSLLGMMPG
IPKEVKNVEIDDKEISRIEGMIHSMTRAERTDPSIIDGSRRARIAAGSGCDVGQISQLVK
QFQEMQKMMKNMPGLAGRAMKKKNKKKKGKGGGRTTPKGGRTTPAGGDKKPFSLPGLDQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggcactcagcgaccggttcgagacgatcttcagcggcatccgcggcaagggg
aagctgcgcgaggccgatgtcgacgaggcgatgcgggagatccgcctcgcactgctcgag
gccgacgtcaacttcaccgtcgtcaagaacctgatcgcccgcatccgtgagcgctcgatc
ggcaccgaggtcagccaggccctgaacccgggccaacaggtcgtcaagatcgtcaacgaa
gagctcgtcgagtcgctcggcggcgagacgatcaagatctcctacgcctccaagccgccc
accgtcgtgttgatggccgggctccagggttcgggcaagacgaccaactcggcgaagctc
gcacgctggttcaagagccagggtcgcaacccgctcctcgtcggcgccgacctccaacgt
cccgccgcagtccaacagctccgcaccctcgccggccagatcgacgtgtcggtcttctcg
gccagcgacgagatcgtcgcgtcggggaccggtgacccggtcgccgtcgccaaggactgc
atcgacgaggcgcgtcgtctcggcaaggacgtggtcatcgtcgacaccgcgggtcgtctg
gcgatcgacgccgagttgatggagcaggtccgccagatctccgaggccaccagccccgac
tacaccttcctcgtcgtggacgcgatgaccggccaggacgccgtcacggtcgccgagaac
ttcaacgagaccctggcgctcgacggcgtcatcctcaccaagctcgacggcgacgcccgt
ggcggcgccgcactgtcggtcaaggaggtcgtgggcaagcccatcgccttcgcctcgacc
ggcgagaagctcgacgacttcgacctcttccaccctgaccgcctcgccggccgcatcctc
ggcatgggcgacgtcctgaccctcatcgagaaggccgaggaggtgttcgaggagaaggag
gccgaggccgcagcccagaagctgatggacggccacttcaccttcgacgacttcctcgaa
cagatgcagcaggtcaagaagatgggctcgatctcgagcctcctcgggatgatgcccggc
atccccaaggaagtgaagaacgtcgagatcgacgacaaggagatctcgcgcatcgagggg
atgatccactcgatgacccgggccgagcgcaccgatccctccatcatcgacggctcgcgt
cgggctcgcatcgccgccggctccggctgcgacgtcgggcagatctcccaactggtcaag
cagttccaggagatgcagaagatgatgaagaacatgccgggcctggccggtcgggcgatg
aagaagaagaacaagaagaagaagggcaagggcggcggtcgtacgacccccaagggcgga
cgcacgaccccggccggcggcgacaagaagccgttctcgctcccgggcctcgaccagtag
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