Actinospongicola halichondriae: AB8619_05515
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Entry
AB8619_05515 CDS
T11204
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ahai Actinospongicola halichondriae
Pathway
ahai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AB8619_05515 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahai03400
]
AB8619_05515 (recC)
Enzymes [BR:
ahai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AB8619_05515 (recC)
DNA repair and recombination proteins [BR:
ahai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AB8619_05515 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
XQO38988
LinkDB
All DBs
Position
complement(1083986..1087441)
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AA seq
1151 aa
AA seq
DB search
MFQIHRSARADALVDALVDVVTAPTGDPFTPELIAVPTRGVERWLTHRIAAAAGTGPGRE
DGVCANVDFPFPGRLVGDVLAEASGVDRREDPWRPERLVWPLLEVIDESMGQEWLALLAT
HLGYGTGTSAGDDLRQDRRFATARHLADLFDQYGIHRPDLVLSWLDHRGASHHDGVADDA
QWQPRLWLALRDRVATPSPPERIAQACARLRAGTIEVDLPDRISLFGLTRLPATYLDVLR
AIAVSRDVHLFALHPSSTLWDRVAATSVPPLPLPRADDPTAGLAENPLLRTWGTDTREMQ
LVLTAAADAVHAHHPIDDGPPTSLLQRVQADVRDDRAPVGRPRPGVDDERHVLDDRDRSI
EVHSCHGRARQVEVARDAICHALADDSTLEPRDVIVLCPDIDKFAPLLHATFGAAAPRPD
PGAPAPPERGVPYLPYRLADRSLRQTNPLLASLDTLLALVDSRLTAPDLISFIGREPVRT
RFQFDDDAIERIAEWTSTSGARWGLDGARRARYQLADVDANTWRAGLDRVLLGVAMSTDG
SRLLGGRLPLDDVESGDVDLAGRFAEVLDRIDTVVGSAAEAHPIGEWVELLGRSVDLLMA
ARPADAWQRVQVDHVLREVLDEATADGESAQGPLSLAEVRALLRDRLRGMPTRADFRTGA
ITMCTLVPMRAVPHRVVCILGLDDGTFPRTGRADGDDLLRRLPHVGDRDPRTEDRQLLLD
ALLAATDRLIITTTGADVRTNEPRPPAVPLSELLDVIDRTAVTSDGVDGGAAVTTSHPLQ
PFDPAAHRVDGDRGPWAFDLVGLAGARAVQAPRSAAPRFLPVTLPPAPTTAVIALDDLVR
FVQHPVREFLRQRLGLNVWEDDDALDDAIPVELDALQRWAIGQRLLQRLLAGDEIEAAVE
AELAVGALPPQAMGRATIESIEGIASRIHAVAESVDAAGVTSSVEIDVPLGEVDALGSVS
LVGTVTGIRGDATSQVSFSSIGARQRLVAWVRLLALSAARPESPWRALTVGKQRNGGGVV
EVGPIDGPPDRRREVAIGHLTDLVRLRSQGLREPLPIPCKTAGAWAEARARGREPEKSAA
RDWESNHRFPGEDADRSHQIVFGGVRRLDELVAMEPTAAERGEGWAEDEPSRLGRLSRRL
WDPLLAVERRR
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgttccagatccaccgcagtgcgcgagccgatgcactcgtcgacgcgctcgtcgacgtc
gtcaccgcgcccacgggcgatcccttcaccccggaactgatcgccgtcccgacccggggc
gtcgagcgctggctcacgcaccggatcgcggctgcggccggcaccggacccgggcgcgag
gacggcgtctgcgccaacgtcgacttcccgttccccgggcggctggtcggcgacgtgctc
gccgaagcgagcggggtcgaccgtcgcgaggatccgtggcgtcccgagcggctggtgtgg
ccgctgctcgaggtcatcgacgagtcgatggggcaggaatggctcgccctcctcgccacc
cacctcgggtacgggaccggtacgtcggcgggcgacgacctccgccaggaccgacgcttc
gccaccgcacggcacctcgccgacctgttcgaccagtacgggatccatcgccccgacctc
gtgctctcgtggctcgaccaccgcggcgcgtcgcaccatgacggggtcgcggacgacgcc
cagtggcagccacggctgtggctggcgctccgcgatcgggtcgccacgccgagccctccg
gagcgcatcgcccaggcatgcgcgcgtctgcgggccggcacgatcgaggtcgacctgccc
gatcggatctcgctcttcggactgacccggctgccggccacctacctcgacgtgctccgc
gccatcgcggtgagccgtgatgtgcacctcttcgcgctccacccttcgtcgacgttgtgg
gaccgtgtcgcagccacgtcggtccccccgctccccctgcctcgcgccgacgacccgacg
gccggcctggccgagaacccgctgctgcggacctggggcaccgacacgcgtgagatgcag
ttggtgctgacggcggccgccgacgcggtgcacgcacatcatccgatcgacgacggcccg
ccgacatccctcctgcagcgcgtccaggccgacgtccgcgacgaccgagcaccggtcggc
cggccacgacctggggttgacgacgagcggcacgtgctcgacgaccgggatcgttcgatc
gaggtccactcgtgtcacggccgggcgcgccaggtcgaggtcgcccgcgacgccatctgc
cacgcgctcgccgacgactcgacgctcgagccgcgcgacgtcatcgtgttgtgtcccgac
atcgacaagttcgcgccgctgcttcacgccacgttcggtgctgctgcgccgcggccggac
cccggcgcgccggcaccgcccgagcgcggcgtcccgtacctcccctaccgcctcgccgac
cggtcgctgcgtcagacgaaccccctgctcgcctcgctcgacacgctcctcgcgctggtc
gacagcaggctcaccgcccccgacctcatcagcttcatcggccgagaaccggtgcggacc
cggttccagttcgacgacgacgcgatcgagcgcatcgcggagtggacgtcgaccagcggg
gcgcgatgggggctcgacggtgcacgtcgggcccgctaccaactcgccgacgtcgacgcg
aacacgtggagagcgggactcgaccgcgtcctgctcggcgtggcgatgagcaccgacgga
tcgcggttgttgggcggacgactccccctcgacgacgtcgagagcggcgacgtcgacctc
gccggacggttcgccgaggtgctcgaccgcatcgacaccgtcgtcggctcggcggcggaa
gcgcaccccatcggtgaatgggtcgaactgctcggccggagcgtcgatctcctcatggcc
gcacgaccggccgatgcctggcagcgcgtgcaggtcgaccacgtcctccgcgaggtgctc
gacgaggcgaccgccgacggcgagtcggcgcaggggccgctgtcgttggccgaggtccgt
gccctcctccgcgatcggctgcgcggcatgcccacgcgcgccgacttccggaccggagcg
atcacgatgtgcaccctggtgccgatgcgggcggtgccccaccgcgtggtctgcatcctc
gggctcgacgacgggacgttccctcgtacgggtcgcgccgacggcgacgacctgctgcgg
cgactcccccacgtcggcgaccgcgaccctcgcaccgaggaccgccaactgctcctcgac
gcactcctcgcggcgaccgaccggctgatcatcaccacgaccggcgccgacgtgcgcacc
aacgagcctcgaccgccggcggtcccgctgtcggagttgctcgacgtgatcgaccgcacc
gcggtcaccagcgacggggtcgacggcggtgctgccgtcaccacatcgcatccgctccag
ccgttcgacccggcggcgcatcgcgtggacggagaccgcggtccgtgggcgttcgacctg
gtcggcctggccggcgcccgtgccgtacaggccccccgctcggccgcgccacggttcctc
cccgtcacgctgccgccggcgccgaccaccgccgtcatcgccctcgacgacctcgtgcgc
ttcgtgcagcatccggtgcgcgagttcctccggcagcgcctcggcctcaacgtctgggag
gacgacgacgcgctcgacgatgcgatccccgtcgaactcgacgcgctccagcgatgggcg
atcggtcaacgcctgctccagcgactgctcgccggcgacgagatcgaagcggccgtcgag
gccgaactcgcggtcggggcgctccctccgcaggcgatgggccgggcgacgatcgagtcg
atcgagggaatcgccagccggatccacgctgtcgccgagtcggtcgacgccgccggggtg
acgtcgtcggtggagatcgacgtcccactgggtgaggtcgacgcgctcggaagcgtgtcg
ctggtcgggacggtgacgggcatccggggagacgccaccagccaggtgtccttcagcagc
atcggcgcccgccagcggctggttgcgtgggtccggctgctggcgctgtcggccgctcga
ccggaaagcccctggcgggcgctcaccgtcggcaagcagcgcaacggcggcggcgtggtc
gaggtggggccgatcgacggaccgccggatcgacggcgagaggtggcgatcggccacctg
accgacctcgtgcgactccgcagccaaggcctgcgcgagccgctcccgatcccgtgcaag
acggccggagcgtgggccgaggcacgtgctcgcggccgggagcccgagaagtccgcggct
cgtgactgggaatccaaccaccggttcccgggcgaggacgccgaccgcagccaccagatc
gtgttcggcggcgtccgtcgtctcgacgaactggtcgcgatggaacccacggcagccgaa
cgaggcgagggctgggccgaggacgaaccctcccgactcggacgcctctcccgtcgactg
tgggatccgttgctcgcagtggagcgtcggcgatga
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