Actinospongicola halichondriae: AB8619_05630
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Entry
AB8619_05630 CDS
T11204
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ahai Actinospongicola halichondriae
Pathway
ahai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB8619_05630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahai03019
]
AB8619_05630
03016 Transfer RNA biogenesis [BR:
ahai03016
]
AB8619_05630
Enzymes [BR:
ahai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AB8619_05630
Messenger RNA biogenesis [BR:
ahai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AB8619_05630
Transfer RNA biogenesis [BR:
ahai03016
]
Prokaryotic type
tRNA degradation factors
AB8619_05630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
S1_RRP5
KH_Vigilin
KH_2
XdhC_CoxI
Motif
Other DBs
NCBI-ProteinID:
XQO39010
LinkDB
All DBs
Position
1111926..1114388
Genome browser
AA seq
820 aa
AA seq
DB search
MTTEPTRVSAAIPGADKELVFETGKLAQQSQGAVLASIGGTKTLVTANGAKSAREGMDFF
PLTIDVEERMYAAGRIPGSFFRREGRPTDLAILTCRLTDRPLRPSFPAGYRHETQVVSTI
MGADGKNPYDVLTINGASAALMLSGLPFDGPIGAVRMAFDTDGEWVPHPEHDEIEESTFD
LVVAGRENDAGEIAIMMVEANGTERAWEHYQNGAPFVTEEAIAQGLEDSKASIKASIDLQ
RELVAAYGAREPIEWSAATDYEDDVLAKVAEVATDRLRDVGAIAVKAEREAAERELKDAV
RAELADEFPGRDKEIGGAIKSVFKKVIRERVVNEGIRIDGRGPADLRPVSAEVGVLDTAH
GSGLFQRGETQVLNVLTLGMPKMDQLLDNLGPQERKRYMHHYNMPPHANGETGRVGSPKR
REIGHGLLAERALLPVIPNMEEWPYTFRLVSEVLASNGSTSMASVCASSLSLMDGGVPIK
APVAGIAMGLIYEDGKYTTLTDILGAEDAFGDMDFKVAGTSEFVTALQLDTKIEGLPADV
LASALQQAKEARTAILDVMNECIPEPRDDVQGTAPKIVSFEIPIDKIGEVIGPKGKMINT
IQGETGADIGVDDDGAVGTVTIGGTDKDAVEEARRQIELIVNPPAADVGEVYMGRVVNIT
KFGAFVNILPGRDGLLHISKIGGKRRIDKVEDELELGQEVEVRVDDIDPNGKVSLSMASE
PADDGDSDGSSNGGGRERGDRDRGGRGGRDGGGRDRKPRSEKSDKGSDDDKGEKASDTEF
VSFEDAFDEELKEEFGDLGPENKPTGGNGGGGGRGRGRRR
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgaacccacgcgggtctctgccgcgatccctggagccgacaaggaactggtc
ttcgagaccggcaagctggcccagcagagccagggcgcagtcctggcctccatcgggggc
accaagaccctcgtcaccgccaacggcgccaagtcggcccgtgaaggcatggacttcttc
ccgctcacgatcgacgtcgaagagcgcatgtacgccgcgggtcgcatcccgggctcgttc
ttccgccgtgaaggccgaccgaccgacctcgccatcctcacctgccgcttgaccgaccgc
ccgctgcggccgagcttcccggccggctaccgccacgagacccaggtcgtctcgacgatc
atgggcgccgacggcaagaacccctacgacgtcctcaccatcaacggtgcgtccgccgcg
ctcatgctcagcggcctcccgttcgacggccccatcggcgccgtccgcatggccttcgac
accgacggcgagtgggtcccgcaccccgagcacgacgagatcgaggagtcgaccttcgac
ctggtggtcgccggtcgcgagaacgacgccggcgaaatcgccatcatgatggtcgaggcc
aacggcaccgagcgtgcgtgggagcactaccagaacggcgctcccttcgtcaccgaggaa
gccatcgcccagggcctcgaggactccaaggcctcgatcaaggcctcgatcgacctccag
cgtgagctcgtcgccgcctacggcgcccgcgagcccatcgagtggagcgcagcgaccgac
tacgaggacgacgtcctcgccaaggtcgccgaggtcgccaccgaccgtctccgcgacgtc
ggcgccatcgccgtcaaggccgagcgcgaggccgccgagcgcgagctcaaggacgccgtc
cgcgccgaactggccgacgagttccccggccgtgacaaggagatcggcggcgccatcaag
tcggtcttcaagaaggtcatccgcgagcgcgtcgtcaacgagggcatccgcatcgacggt
cgcggcccggcggatctccgcccggtctccgccgaggtcggcgtcctcgacaccgcccac
ggttccggcctcttccagcgtggcgagacccaggtcctcaacgtcctgacgctcggcatg
ccgaagatggaccagctgctcgacaacctcgggccgcaggaacgcaagcggtacatgcac
cactacaacatgccgccgcacgccaacggcgagaccggccgcgtgggaagccccaagcgt
cgcgagatcggccacggcctcctcgccgagcgcgccctgctccccgtcatccccaacatg
gaagagtggccctacaccttccgtctggtgtccgaggtcctcgcctccaacggctcgacc
tcgatggcctcggtctgcgcgtcgtccctgtcgctcatggacggcggtgtgcccatcaag
gcgccggtcgccggtatcgccatgggcctcatctacgaggacggcaagtacacgaccctc
accgacatcctcggtgcggaagacgccttcggcgacatggacttcaaggtcgccggcacg
agtgagttcgtgaccgccctccagctcgacaccaagatcgaaggcctcccggccgacgtc
ctggcctcggcgctgcagcaggccaaggaagctcgcaccgcgatcctcgacgtgatgaac
gagtgcatcccggagccccgcgacgacgtccagggcacggccccgaagatcgtcagcttc
gagatcccgatcgacaagatcggcgaggtcatcggccccaagggcaagatgatcaacacg
atccagggcgagaccggcgccgacatcggcgtcgacgacgacggagcggtcggcacggtc
accatcggtggcaccgacaaggacgccgtcgaagaggctcgtcgccagatcgagctgatc
gtcaacccgccggcggccgacgtcggcgaggtctacatgggccgcgtggtgaacatcacc
aagttcggtgcgttcgtcaacatcctcccgggccgcgacggtctcctccacatctcgaag
atcggtggcaagcgccgcatcgacaaggtcgaggacgaactggagctcggccaagaggtc
gaggtccgggtcgacgacatcgatcccaacggcaaggtcagcctctccatggcgtccgag
ccggccgacgacggtgactccgacggttcctccaacggtggtggccgcgagcgcggtgac
cgtgatcgtggtggccgtggtggccgcgacggtggcggtcgtgaccgcaagccccgctcc
gagaagtccgacaagggctccgacgacgacaagggcgagaaggccagcgacaccgagttc
gtctccttcgaagacgccttcgacgaggagttgaaggaagagttcggtgacctcggtccc
gagaacaagcccaccggtggcaacggtggcggtggtggccgcggacgcggtcgtcgtcgc
tga
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