Actinospongicola halichondriae: AB8619_05825
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Entry
AB8619_05825 CDS
T11204
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ahai Actinospongicola halichondriae
Pathway
ahai00300
Lysine biosynthesis
ahai00470
D-Amino acid metabolism
ahai01100
Metabolic pathways
ahai01110
Biosynthesis of secondary metabolites
ahai01120
Microbial metabolism in diverse environments
ahai01230
Biosynthesis of amino acids
Module
ahai_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ahai00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB8619_05825 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB8619_05825 (dapF)
Enzymes [BR:
ahai01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AB8619_05825 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
XQO39049
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Position
1158149..1158934
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AA seq
261 aa
AA seq
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MRVTKHHGLGNDFLVLLDRNADTPIDEDIAIAICDRHRGVGADGLIRVTKPAGRPFRMEL
RNEDGSRAEMSGNGISCMAQAIAMAGYAPDGVVPIDTDAGERLVTVVEETASHQHRMRVA
MGTPKIVGRLAEWEGDRILRAVQVDVGNPHVVCHVADPDDAPDLVAFGERVNASTPGGTN
VELVTTGETGGIVMSVYERGVGPTFACGTGAVAAAAAANDWGLAPRHVRVTQPGGDAEVE
LGEPAHLTVPVVAIAEIEWPL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgaccaagcaccacggactgggcaacgacttcctcgtcctcctcgacaggaat
gccgacacccccatcgacgaggacatcgcgatcgccatctgcgatcgtcatcgcggcgtc
ggagccgacggcctgatccgggtgaccaagcccgccggccgaccgttccggatggagctg
cgcaacgaggacggcagccgcgccgagatgagcggcaacggcatctcgtgcatggcgcag
gcgatcgccatggcgggatacgcgcccgacggggtcgtgccgatcgacaccgatgccggc
gagcggctggtgacggtggtcgaggagaccgcatcacatcagcatcggatgcgggtcgcc
atggggacgccgaagatcgtcggacgcctggccgagtgggagggcgaccggatcctccga
gcggtgcaggtcgacgtcggcaacccccacgtggtgtgccatgtcgccgatcccgacgac
gcccccgacctggtggccttcggcgagcgggtcaacgcgtcgactccgggcggcaccaac
gtcgagttggtgacgacgggcgagaccggtgggatcgtgatgtcggtgtacgagcgtggc
gtggggccgaccttcgcctgcggcaccggagccgtcgccgccgccgctgccgccaacgac
tggggcctggccccgaggcacgtccgggtgacgcaacccggtggcgatgccgaggtcgag
ttgggcgagccggcccacctcaccgttccggtcgtggccatcgccgagatcgagtggccg
ctctga
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