KEGG   Actinospongiicola halichondriae: AB8619_07065
Entry
AB8619_07065      CDS       T11204                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
ahai  Actinospongiicola halichondriae
Pathway
ahai03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ahai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AB8619_07065 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ahai03400]
    AB8619_07065 (uvrA)
DNA repair and recombination proteins [BR:ahai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AB8619_07065 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AB8619_07065 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 RsgA_GTPase AAA_16 nSTAND1 AAA_33 AAA_23 AAA_21 AAA_22 DnaJ_CXXCXGXG NACHT Viral_helicase1 cobW
Other DBs
NCBI-ProteinID: XQO39289
LinkDB
Position
1422296..1425148
AA seq 950 aa
MDKLVVSGAREHNLKGVDLELPRDKLIVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSAY
ARQFLGQMDKPDVDFIEGLSPAISIDQKSASRNPRSTVGTITEVYDYLRLLFARIGVPHC
PDDGTPVARQTPQQIVDRIMELETGTRFQVLAPVVHGRKGTYDTLLDDLYGQGFARAIVD
GELIELGDHSELELERYEMHTIQVVVDRLVAKDNMARRLTDSLETALALADGVAEIQIVP
KGRDAEPEDTLTFSQHFACPTCGMSFQDLAPRNFSFNSPYGACTACDGLGTRYEVDPQLV
VPDPDLSLEEGAIAPWSGGRSTYFSRLVESVAEHLDIEPGTPWSKLTKKQTNALLHGKGV
SKVTVTYTNRYGRTRTYNANFEGAIPYLTRRHGEAESDSQREQIEGYMREVACPTCAGKR
LNPISLAVLVDGHDISEICDLSIGEAAKTLAGLELSERDRIIAEQVVKEINARMGFLLDV
GLDYLTLSRSAGTLAGGEAQRIRLASQVGSGLVGVLYVLDEPSIGLHQRDNRRLIDTLIR
MRDLGNTVIVVEHDEETIAEADHVVDIGPGAGEHGGAVVHSGTYKQLLKNKESVTGQYLS
GRKSIPIPEKRRTPGDQRIRVVGAREHNLQDVSVEFPLEMFTCVTGVSGSGKSTLVNEIL
LRSLMQHVYKSKLPPGLHKRVEGMESLDKVIAIDQSPIGRTPRSNPATYTGVWDHVRKLF
AQTNEAKVRGYLPGRFSFNVKGGRCEACAGDGTIKIEMHFLPDVYVPCEICKGKRYNRDT
LDITFKGKNVSEILDMPCEEALEFFANQPNIARHMQTICDVGLGYVRLGQSAPTLSGGEA
QRVKLASELAKRSTGHTIYILDEPTTGLHFEDIRKLLTVLSRLVDQGNTVLVIEHNLDVI
KTADWIIDLGPEGGSGGGTIVAEGPPEHIATVSQSHTGHFLAPILGVDRS
NT seq 2853 nt   +upstreamnt  +downstreamnt
gtggacaagctggtcgtctccggagcgcgcgaacacaacctcaagggcgtcgacctcgag
ctgccgcgcgacaagctcatcgtcttcaccggactgtcggggtcgggcaagagctcgctc
gcgttcgacacgatctacgccgagggccagcgccgctacgtcgagtcgttgtcggcctat
gcccggcagttcctcggtcagatggacaagcccgacgtcgacttcatcgaaggcctgtcg
ccggccatctccatcgaccagaagtcggcgagtcgcaaccctcgttcgaccgtcggcacc
atcaccgaggtctacgactacctccgcctgctgttcgcccgcatcggcgttccacactgt
ccggacgacggcacgccggtggctcgccagacgccgcaacagatcgtcgaccggatcatg
gagctcgagaccgggacgcgattccaggtcctcgctccggtggtccacggccgcaagggc
acctacgacaccctcctcgacgacctctacggccagggtttcgcccgagcgatcgtcgac
ggtgagctgatcgagctcggtgaccacagcgagctcgagctcgagcgctacgagatgcac
accatccaggtggtggtcgaccgtctcgtcgccaaggacaacatggcccggcggctcacc
gactcgctcgagaccgcgctcgccctggccgacggcgtggccgagatccagatcgtcccc
aagggccgcgacgcggagccggaggacacgctcaccttcagccagcacttcgcctgtccg
acctgtgggatgtcgttccaggacctggcgccccgcaacttctcgttcaactcgccctac
ggcgcctgcaccgcgtgcgacggcctcgggactcgctacgaggtcgacccgcagttggtc
gtgcccgaccccgacctttcactcgaagagggcgcgatcgccccgtggtccggtggtcgg
tccacctacttctcacgactcgtcgagtcggtggccgaacacctcgacatcgagcccggt
accccgtggtcgaagctgaccaagaagcagaccaacgccctgctccacggcaagggcgtc
tcgaaggtcacggtcacctacacgaaccgctacgggcggacccgtacctacaacgccaac
ttcgagggcgcgatcccgtacctcacgcgtcgccacggtgaggccgagtccgactcgcag
cgcgagcagatcgaggggtacatgcgcgaggtcgcgtgtcccacgtgtgccggcaagcgc
ctcaacccgatctcgctcgccgtcctggtcgacggtcacgacatctccgagatctgcgac
ctctcgatcggcgaggccgccaagacgctcgccgggctcgagttgtccgagcgggatcgc
atcatcgccgaacaggtcgtcaaggagatcaacgcccggatgggcttcctcctcgacgtg
ggcctcgactacctgacgctgtcccggtccgccggaacgctcgccgggggagaggcgcaa
cgcatccgcctggcctcgcaggtcggttcaggcctcgtcggtgtgctctacgtgctcgac
gagccgtcgatcggcctgcaccagcgcgacaaccgtcgcctcatcgacaccctgatccgc
atgcgcgacctggggaacacggtcatcgtcgtcgagcacgacgaggagaccatcgccgag
gccgaccacgtggtcgacatcggacccggagccggcgaacacggcggagcggtcgtccac
tccggcacctacaagcagttgctgaagaacaaggaatcggtcaccggccaatacctgtcc
ggccggaagtcgatccccatccccgagaagcggcggacgcccggcgaccaacgcatccgc
gtggtgggtgcacgcgagcacaacctccaggacgtgtcggtcgagttcccgctcgagatg
ttcacgtgcgtcaccggtgtgtcgggatcgggcaagtcgacgctggtcaacgagatcctg
ctgcggtcgttgatgcagcacgtctacaagtcgaagctgccgccgggcctgcacaagcgc
gtcgaggggatggagagcctcgacaaggtcatcgccatcgaccagtcgccgatcggtcgg
acgccacggtcgaaccccgccacctacaccggtgtctgggaccacgtccgcaagttgttc
gcccagaccaacgaagccaaggtccggggctacctgcccggtcggttcagcttcaacgtg
aagggcgggcgctgcgaggcctgcgccggcgacggcacgatcaagatcgagatgcacttc
ctgcccgacgtctacgtgccgtgcgagatctgcaagggcaagcggtacaaccgcgacacg
ctcgacatcacgttcaagggcaagaacgtgtccgagatcctcgacatgccgtgcgaagag
gcgttggagttcttcgccaaccagcccaacatcgcccgccacatgcagaccatctgcgat
gtgggtctcggttacgtgcgcctggggcagtccgcacccaccctctccggtggcgaggcg
cagcgggtgaagctggcatccgagttggccaagcggtcgaccggccacaccatctacatc
ctcgacgaacccaccaccgggctccacttcgaggacatccgcaagctgctgacggtcctg
tcccgcttggtcgaccagggcaacaccgtgctggtcatcgagcacaacctcgacgtcatc
aagaccgccgactggatcatcgacctcggacccgagggcgggtcggggggtggcaccatc
gtcgccgaaggcccgcccgagcacatcgccaccgtgtcgcagagccacaccggtcacttc
ttggcccccatcctgggcgtggatcgctcctga

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