Actinospongiicola halichondriae: AB8619_08200
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Entry
AB8619_08200 CDS
T11204
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
ahai Actinospongiicola halichondriae
Pathway
ahai00550
Peptidoglycan biosynthesis
ahai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ahai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB8619_08200 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ahai01002
]
AB8619_08200 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ahai01011
]
AB8619_08200 (dacB)
Enzymes [BR:
ahai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AB8619_08200 (dacB)
Peptidases and inhibitors [BR:
ahai01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
AB8619_08200 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ahai01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
AB8619_08200 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
XQO39508
LinkDB
All DBs
Position
1675601..1677043
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AA seq
480 aa
AA seq
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MDSTEPLIRSRAILRWLPAMILAIVMLGAGVVVARIGGPPVRAAVSIETTEIPVLSVRRS
LDPLLRRSADARLVARLDEFVATQPDDTCLSVRTGGVDYAHRGDDRQAPASLQKLLTATA
ALIELGPDATFETQVLGPPVVDGVVGGDLYLRGGGDPILSTMPYVARERNQPQIASDLAR
LADAVVAQGITTVYGSVVGDESRYDAVRYHPVWPSRFLAQGQIGPLSALSVNDGFAYFPE
ETGVFGAAADPAGYAARVLTDLLRERGVVVGAEPVAGATPGDLAVVAAHTSPPLAEIVAQ
MLQESDNNTAELLLKELGSRVVGDGSFAGGQTAITEILGDAGLSMDDATVVDGSGLAVED
QVTCDLIVDVLEHGATAQVVDAGLAVAGRTGTLSRRWVGTDLEGRVRAKTGTLNHVTGLA
GHAASADDGDVRFALIVNLPDDVFVDADIVAGQERLAEILTAHPDLPDVSSVRPGADGGK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtggactcgactgagccgctgatccgctcccgggcgatcctccggtggctgccggccatg
atcctggcgatcgtgatgctgggggccggcgtcgtcgtcgcccgaatcggcggtcctccg
gtccgggccgccgtgtccatcgagacgaccgagatcccggtcctgtcggtccgccgatcg
ctcgatccgctgctgcgccggtcggcagatgcccgactggtcgcgcgtctcgacgagttc
gtcgccacgcagcccgacgacacctgcctctcggtgcgcaccggcggagtcgactacgcg
caccgaggcgacgatcgccaagccccggcgtccctgcagaagctgctcaccgcgactgcc
gcactgatcgaactcggacccgacgcgaccttcgagacccaggtcctgggcccacccgtc
gtggacggggtcgtcggtggcgacctgtacctgcgcggcgggggtgacccgatcctgtcg
acgatgccgtacgtggcgcgcgagcggaatcagccacagatcgccagcgatctggctcgt
ctcgcggatgcggtcgtggcccagggcatcaccaccgtctacggatcggtggtgggggac
gagagtcgctacgacgccgtccgttaccacccggtgtggccgtcgcggttcctcgcccag
ggccagatcggtcccctgagtgccctctcggtgaacgacggcttcgcctacttccccgag
gagaccggcgtgttcggggcggcagccgatccggcgggatacgccgctcgcgtgctcacc
gacctcctgcgcgagcgcggcgtggtggtcggtgccgagccggtcgccggggcgacgccg
ggcgacctcgctgtcgtcgccgcgcacacgtcgccgccgctggccgagatcgtcgcccag
atgctccaggagtccgacaacaacaccgccgagctgctcttgaaggaactcggctcccga
gtcgtgggcgacggttccttcgccggcggacagacggcgatcaccgagatcctcggtgat
gccggactgtcgatggacgacgcaacggtggtcgacggatccgggctggcggtcgaggac
caggtgacctgcgacctgatcgtcgacgtgctcgagcacggcgcgacggcgcaggtcgtc
gacgccggactcgccgtcgccggccgaaccgggaccttgtcgcgccgctgggtcggcacc
gacctcgagggcagggtcagggccaagaccggcaccctcaaccacgtgaccggcctcgcc
ggccacgctgcgtcggccgacgacggcgacgtgcggttcgcactcatcgtgaacctgccc
gacgacgtgttcgtcgatgccgacatcgtggcgggacaggaacggctggccgagatcctg
acggcacaccccgacctcccggacgtctcgtctgtgcgtccaggcgcagatggcggcaaa
tga
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