Actinospongicola halichondriae: AB8619_10545
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Entry
AB8619_10545 CDS
T11204
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
ahai Actinospongicola halichondriae
Pathway
ahai02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ahai00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AB8619_10545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahai03021
]
AB8619_10545
Transcription machinery [BR:
ahai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB8619_10545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
XQO36124
LinkDB
All DBs
Position
2139488..2140435
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AA seq
315 aa
AA seq
DB search
MAGPKRNGHRGARGPDDLVGRYLTEIGQYPLLIASEEVELAQQIECGKEAAARLEAETDL
TPAERAALRRSVRTAGKAKQRFIQSNLRLVVSIAKRYQSTGLPLLDLIQEGNLGLIRAVE
KFDHRKGFKFSTYATWWIRQAIGRGVADKGRTIRLPSHVVDTLTTLSKASGTLLKELGRE
PTPEELSELTGMTVDRVITALGATADVISLSAGVGEDATEFGDLLPDENAEVPFDVAARS
LEKIALRNLLYTLSDREREVLELRFGLVGERPLTLDEVGRHFELTRERIRQIEAKALTKL
RHPCSPNTRGRALAV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggccggtccgaagcgcaacggtcatcggggggcgcgcggacctgacgacctcgtcggc
cgctatctcaccgagatcgggcagtacccattgttgatcgcgtccgaagaggtcgaactc
gcacagcagatcgagtgcgggaaggaagccgccgctcgactcgaggccgagaccgacctc
accccggccgagcgtgccgcgctgcgacgctcggtccgcaccgccggcaaggcgaagcag
cggttcatccagtcgaacctgcgcctcgtcgtgtccatcgccaagcgctaccagtcgacg
gggctcccactcctcgacctcatccaggaaggcaacctcgggctcatccgggcggtcgag
aagttcgatcaccgcaagggcttcaagttctcgacctacgccacgtggtggatccgccag
gccatcggccgcggcgtcgccgacaagggccgcaccatccgcctgccatcacatgtcgtc
gacacgctcaccacgttgtcgaaggcctcggggacgctgctcaaggaactcggtcgcgag
ccgactcccgaggagttgtccgagctgacgggcatgacggtcgatcgagtgatcaccgcc
ctgggcgcgaccgccgatgtgatctcgctgtcggccggcgtgggtgaggacgcgacggag
ttcggcgacctgctcccggacgagaacgccgaggtccccttcgacgtcgccgcacgcagt
ctcgagaagatcgccctgcgcaacctgctctacacgctctccgaccgcgagcgcgaggtc
ctcgagctccgcttcggcctggtcggcgaacgcccactgacgctcgacgaagtcggtcga
cacttcgaactcacccgcgagcggatccggcagatcgaggccaaggcgctcacgaagctc
cgccatccgtgctcccccaacacacgcgggcgagcgctcgccgtctga
DBGET
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