Actinospongicola halichondriae: AB8619_11390
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Entry
AB8619_11390 CDS
T11204
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ahai Actinospongicola halichondriae
Pathway
ahai00550
Peptidoglycan biosynthesis
ahai01100
Metabolic pathways
ahai01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ahai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB8619_11390 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB8619_11390 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ahai01011
]
AB8619_11390 (mrdA)
Enzymes [BR:
ahai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AB8619_11390 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ahai01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AB8619_11390 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
XQO36283
LinkDB
All DBs
Position
complement(2304722..2306752)
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AA seq
676 aa
AA seq
DB search
MTNAESPRFRLAVLAVVVLALFAALFARLWYLQVLSSEPLLEAAEANRIRTIQVEAPRGR
ILDRNGKVLVDNRVSTVVTVDRVLYNELDDDDAAEMINRLAAEMSRYGSPATVEALVERV
NDQRYSQYAPVPVAEDVTEELKIYVEEHRELFPSVTVERTAVRRYTYGTRAAHVIGYVGE
IGDTDLEDRANKPKTYQRGDQIGKTGVERIYEDDLRGMPGQTVYEVDAQGRPVRVLEDLS
RPPIPGDDVWLTIDITTQSVAEDLLKEALDGARNRRPSGDNLKNEAPGGSVVVTDPRDGS
VLAMASYPTFDPADFVNGISSSRYAFLTDEANHDPLTNRAIQGQYAPGSTFKLISGYAAL
ANGLREATTPYYDTGSHTLENCEGQCTFRNAGSKAYGTVDLQRSITVSSDAYFYSVGEDF
WNARGRLGDEAFQESARLFGFDQETGVPLPFEQDGRIPTPEQRKAQYDANPGAFLERNWF
TGDNVNMAIGQGDVAVTPLQLANVYATFANGGTRYAPNIATKITRGGSENTVKRTFEPRI
NGTLELPPEYRDSLLQGLVGVTSTNGGTAFGTFQGFPLTEFPVAGKTGTAQVNGKADTAV
FAAFGPAYAPEYQVAVILEESGFGGTAAAPVARKLFDQFAGVTPPPELQPGGELVYPEIV
DDQPTQEDLARVGSSD
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgcagagtctccacgtttccgtctcgcggtgctcgcggtcgtggtgctggcg
ttgttcgctgccctcttcgctcggctctggtacctgcaggtgctgtcgtcggaaccgctg
ctcgaggcggccgaggcaaatcgcatccggacgatccaggtcgaagcacctcgtggtcgg
atcctcgatcgcaacggcaaggtgctggtcgacaaccgcgtctcgacggtcgtcacggtc
gatcgggtcctgtacaacgagctggacgacgacgacgcggccgagatgatcaaccggctc
gcggccgagatgtcccgctacgggtccccggccacggtcgaggccctggtcgagcgggtc
aacgaccagcggtactcgcagtacgcgccggtaccggtcgccgaagacgtgaccgaggaa
ctcaagatctacgtcgaggaacaccgcgagctgttcccgtcggtcaccgtcgaacggacg
gcggtgcgtcgctacacctacgggaccagggccgcgcacgtgatcggctacgtcggggag
atcggcgacaccgatctcgaggaccgtgcgaacaaaccgaagacgtaccaacgtggcgac
cagatcggcaagaccggcgtcgaacggatctacgaggacgatctgcgtggcatgcccggc
cagaccgtctacgaggtcgatgcccagggtcgtccggtgcgcgtgctcgaggacctgtcg
cgcccgccgatccccggcgacgacgtctggctgacgatcgacatcaccacacagtccgtc
gccgaagacctcctgaaggaggcgctcgatggcgctcgcaaccggcgcccgagcggcgac
aacctgaagaacgaagctcctggcggttcggtcgtcgtcaccgaccctcgcgacggctcg
gtgctcgccatggcgagctacccgacgttcgaccccgccgacttcgtcaacggcatctcg
tcgtcgcgctatgccttcctgaccgacgaggccaaccacgacccgctcaccaatcgcgcc
atccagggccagtacgcaccgggctcgaccttcaagttgatctccgggtatgcggcgttg
gccaacgggctccgtgaggcgaccacgccgtactacgacaccgggtcacacaccctcgag
aactgcgaaggtcagtgcaccttccggaacgcgggctcgaaggcctacggaaccgtcgat
cttcagcggtcgatcaccgtgtcgtcggacgcgtacttctactcggtgggcgaggacttc
tggaacgctcgtggccggttgggtgacgaggcattccaggagtcggccaggctcttcggg
ttcgaccaggagaccggcgtcccgctgccgttcgagcaggacggacgcattccgacccct
gagcaacgcaaggcgcagtacgacgcgaaccccggcgcgttcctcgagcgcaactggttc
acgggcgacaacgtcaacatggcgatcggtcagggcgacgtcgccgtgacgccgctgcaa
ctggccaacgtgtacgcgaccttcgcgaacggcggcactcggtacgccccgaacatcgcg
acgaagatcacgcgcgggggaagcgagaacacggtcaagcggaccttcgaaccccggatc
aacggaacgctcgaactgccgccggagtaccgtgactcgctgctccagggtctggtcggg
gtcacgtcgaccaacggcggcaccgcgttcggcacgttccagggcttcccgctcactgag
ttccccgtcgccggcaagaccggcaccgcccaggtcaacggcaaggccgacacggcggtc
ttcgcggccttcgggcctgcctacgcccccgagtaccaggtcgccgtgatcctcgaggag
tccggtttcggtggcacggcggccgcacccgtggctcgcaagttgttcgaccagttcgcc
ggcgtgaccccgccgcccgaactccagcccggtggcgagttggtctaccccgagatcgtc
gacgaccagccgacgcaggaagacctcgctcgcgtggggagctccgactga
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