Actinospongicola halichondriae: AB8619_15970
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Entry
AB8619_15970 CDS
T11204
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ahai Actinospongicola halichondriae
Brite
KEGG Orthology (KO) [BR:
ahai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahai03016
]
AB8619_15970 (truA)
Enzymes [BR:
ahai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AB8619_15970 (truA)
Transfer RNA biogenesis [BR:
ahai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AB8619_15970 (truA)
Prokaryotic type
AB8619_15970 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
YlmH_RBD
Motif
Other DBs
NCBI-ProteinID:
XQO37155
LinkDB
All DBs
Position
complement(3243835..3244575)
Genome browser
AA seq
246 aa
AA seq
DB search
MTVAYDGTKFHGFAVNPGVSTVGGSLLEGLERVLRHPVDLTCAGRTDKGVHAHGQVVDFA
TTEGVDLDALVRSLNGLCGPSIAVRDARVVDNDFSARFDATFRRYRYTIHNSPVPDPFST
TTAWQVREPLSLDRLRLACDPLLGTHDFASFCRRNTRADGTDAPTTRDVLDARWEVEADG
TLRFWIKATSFCHQMVRSIVGTLVEAGQGRKTPGDIMGIIDARDRAAAGPVAPPHGLSLW
EVGYPD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgcgtacgacggcaccaagttccacgggttcgccgtgaaccccggggtctcg
accgtcggcggatcgttgctcgagggcctcgaacgggtccttcgtcatccggtcgacctc
acctgcgccggccggaccgacaagggcgtccacgctcacggccaggtggtcgacttcgcc
acgaccgagggcgtcgacctcgatgcgttggtccgctcgttgaacggcctgtgtgggccg
tcgatcgccgtacgtgacgcgcgcgtcgtcgacaacgacttctcggcgcgcttcgacgcg
acgttccgccgctaccgctacacgatccacaactcgccggtacccgacccgttctcgacg
acgacggcctggcaggtgcgcgaaccgttgtcgctcgaccgactccgtctggcgtgcgac
ccgctgctcgggacccacgacttcgcctccttctgtcgacgcaacacccgcgccgacggg
accgacgcaccgacgacgcgcgacgtcctcgacgcccggtgggaggtcgaggccgacggc
acgctccggttctggatcaaggcgacctcgttctgtcaccagatggtgcgatcgatcgtc
ggcaccctcgtcgaggccggccagggcaggaagacgcccggcgacatcatgggcatcatc
gacgcccgagaccgcgccgctgccggccccgtcgccccgccccacggtctcagcctctgg
gaagtcggctacccggactga
DBGET
integrated database retrieval system
