Alkalicoccus halolimnae: FTX54_000225
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Entry
FTX54_000225 CDS
T09800
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
ahal
Alkalicoccus halolimnae
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
FTX54_000225 (rnmV)
Enzymes [BR:
ahal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
FTX54_000225 (rnmV)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WWD81557
UniProt:
A0A5C7F1Q1
LinkDB
All DBs
Position
53848..54390
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AA seq
180 aa
AA seq
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MIVVEGKNDTQTLRRFVQCDTIETSGSGITKTTIEKIRLANERRGVIIFTDPDFPGQKIR
HIIDQSVPGCRHAFLPKHAAIDEQKGKVGIEHADKEAILEALDAVKTSLPNAEKEAVPSW
LELHEAGLLAGPGAREKREKLGNMLHIGYSNGKQFVKRLQQFQISRREFYEAVQKLEEKS
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcgtagaaggaaagaatgatacccagaccctccgccgcttcgtccagtgtgac
actattgaaacgagcggttcggggattacgaaaacgacgattgagaaaatccggcttgcc
aatgagaggcggggcgttattatttttacggatccggattttcccggtcagaaaatccgt
catattatcgatcagtcggtgccggggtgcaggcatgcctttctcccgaaacatgcagcg
attgatgaacaaaaagggaaggtagggattgagcatgctgataaagaagctatcctggag
gcactcgacgccgtgaaaacctctcttccgaatgccgaaaaagaagcggtgccttcctgg
ctcgagcttcacgaagcagggctgctggccggacccggtgcaagagaaaagcgcgagaag
ctggggaatatgctccatatcggctattcaaacggcaagcagtttgtgaagcggctgcag
cagttccaaatcagccgccgggaattttatgaagcagtacaaaagctggaggaaaaatca
tga
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