Alkalicoccus halolimnae: FTX54_000255
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Entry
FTX54_000255 CDS
T09800
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
ahal
Alkalicoccus halolimnae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA
AAA_16
MCM
nSTAND3
AAA_3
AAA_7
HTH_50
VpsR
AAA_6
Motif
Other DBs
NCBI-ProteinID:
WWD80056
UniProt:
A0A5C7FCN6
LinkDB
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Position
60177..61538
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AA seq
453 aa
AA seq
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MKGSVLIIDDEPSICASLEFALENDYQVWSATDPTDAYTVLKEEKIDLCLVDLRIGKENG
IEVLEKIKAFDPNTACIMITAHGTISSSVEALQKGAYSYLTKPLNMDELMAVIARAFQYL
NLNEKVNYLTGELEKKYTREGFLARSEAMNKVFKLIEKVKQVNTNVLITGESGTGKELVA
RSLHFSGGRQQEHFEVVNCAAIPEQLLESELFGYEKGAFTGAVQAKAGKFEAAHKGTIFL
DEIGDMPLNVQVKLLRVLQRKEITRLGSNRTLSLDVRVIAATNKNLKEEVQEGRFREDLY
FRLNVIQIHLPPLRERMDDMILLASHFIHTINKELGIKIKGLTKQAENKLKLYSFPGNIR
ELRNIIESSMVIADGEYIDVEDLPETVESGQQTGLEKNISSDSKTLLTLKEVEKEQIKQA
LDYYNWHRKQTAEILGISERGLRDKIKLYELSP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggatctgtacttattatcgatgacgaaccatcaatctgcgcttcgttggagttt
gcgctggaaaatgactatcaagtatggagcgctacggatccaacagacgcctacactgta
ttaaaggaggagaagattgatctttgtctcgtagatctgcggataggcaaggaaaatgga
atagaagtacttgaaaaaattaaggcttttgatccgaacactgcatgcataatgatcact
gcgcatggcacaatctcctcctctgtggaagctcttcaaaaaggagcctactcttatttg
acgaagcctctgaatatggatgaattaatggctgttattgctcgagcctttcagtacctg
aacctgaacgaaaaagtgaactatcttaccggagaactggagaaaaaatatacccgggaa
ggatttcttgcccgcagtgaagcgatgaataaagtatttaagcttatcgaaaaagtgaaa
caagtgaatacgaatgtattgattaccggggagagcggtaccggaaaggaactggtggcc
cggtctctgcatttttcgggagggcgtcagcaggaacatttcgaagtggttaactgcgca
gcgattccagagcagcttcttgagagtgagttattcggctatgaaaaaggagcttttact
ggtgcggtccaggcaaaagccgggaagttcgaagcagcccataaaggaacgatttttctc
gatgaaataggggacatgcctctgaatgtacaggtgaaactgctgcgcgtacttcagcgg
aaagaaattacccggctcggctccaaccggacgctcagcctcgacgtaagagtgatagcc
gctacgaacaaaaatttaaaagaagaagtacaggaaggacgctttcgggaagatttatac
ttccgtttaaatgtcattcaaatccatttacccccgctacgggaacggatggatgatatg
attcttcttgccagtcacttcatccatacgatcaataaagagctggggattaagataaaa
ggtctgacgaaacaagcggagaataaactgaagctctatagtttcccgggaaatatacgg
gagctgcgaaatattattgaatcttcgatggtcattgctgacggtgaatatatcgatgtt
gaagaccttcctgaaacagtagagagcggacagcagaccggccttgaaaaaaacatttcc
tccgacagcaaaactctcctcactttgaaggaagtggaaaaagaacaaattaagcaggca
ctggactattataactggcatagaaagcagacagcagaaatactgggcatcagtgaaaga
gggcttcgtgataaaataaagctgtatgaactttctccttaa
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