Alkalicoccus halolimnae: FTX54_000525
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Entry
FTX54_000525 CDS
T09800
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ahal
Alkalicoccus halolimnae
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahal03400
]
FTX54_000525 (radA)
DNA repair and recombination proteins [BR:
ahal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FTX54_000525 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
Rad51
RecA
AAA_24
DAP3
AAA
AAA_14
AAA_5
NACHT
zinc_ribbon_6
AAA_16
DUF7125
AAA_30
nSTAND3
ABC_tran
Elong_Iki1
HypA
MCM
ATPase_2
DUF7129
KTI12
AAA_31
NTPase_1
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
WWD80088
UniProt:
A0A5C7FGH2
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All DBs
Position
112635..114041
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AA seq
468 aa
AA seq
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MAKQKTKFVCQDCGYESTKWMGKCPGCHSWNTLVEEREAAPKTQRRGFSTTDGPRKIKAE
PITKIERRDEARSSTHINELNRVLGGGIVPGSLVLFGGDPGIGKSTLLLQVSAMVAGNKK
RVLYISGEESVKQTKLRADRLGIEEDDLFVLAETEVAVIEQVIEEMQPALVVIDSIQTVH
QEDVTSAPGSVSQVRECTASFMRIAKTKGIAIFLVGHVTKQGAIAGPRILEHMVDTVLYF
EGDQHHTYRILRAVKNRFGSTNEIGIFEMKESGLEEVLNPSEIFLEERSAGAAGSAVVAS
MEGTRTVLVEIQSLISPTSFGNPRRMATGVDHNRISLIMAVLEKRVGMMLQNQDAYIKVA
GGVRLDEPSIDLAITVAIASSFRDVATEAGDVIIGEVGLTGEIRRVSRIEQRVMEAAKLG
FTRVIVPQKCLEGWKAPSGIQVVGVKTVAEALEVTLGGKTSGTPSFEL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaaaaaacaaagtttgtctgccaggactgcggttacgaatcaacgaaatgg
atgggcaaatgcccgggatgccacagctggaacacgctcgtcgaagaacgggaagccgct
cctaaaacgcagcggcgcggtttttccactacggatggtcctaggaaaataaaagcggaa
ccgattacgaaaattgaacgccgcgatgaagccaggagcagcacgcatatcaatgaattg
aaccgtgtactcggaggaggcatcgttccgggttctttagtcttgttcgggggagacccc
ggaatcggcaaatcaacgcttctgctgcaggtttccgccatggtagccggaaataaaaag
cgggtgctttacatatcaggagaggaatcggtcaaacagaccaagcttcgtgctgatcgt
ctgggtattgaagaggatgacctgttcgtgcttgcagaaacagaggttgcggtcattgaa
caggtgattgaagaaatgcagccggctttagtagtcattgattctatccaaacggtgcat
caggaagacgtaacgagtgctccgggaagcgtttcccaggttagggaatgcaccgcttca
tttatgcggattgcgaaaacgaaaggaattgctatttttcttgtcggccacgtaaccaag
cagggagcaatagccggtccgagaattttggagcacatggtcgataccgttctttatttt
gaaggagaccagcatcatacgtaccggattctccgtgccgtaaaaaatcgcttcgggtcc
accaatgagatcggtatttttgaaatgaaagaaagcggattggaagaagtattgaaccct
tctgaaatttttctcgaagaacgttcggctggagctgccggttcggctgttgtcgcttct
atggaagggacgcgcaccgtgctcgttgaaattcagtccctgatttctccgacgagcttc
gggaacccgcggcgtatggctacaggcgtggatcataaccgtatttccctgattatggca
gtgctcgaaaagcgtgtcggcatgatgctgcagaatcaggatgcttatattaaagttgcc
ggcggtgtgagattggacgagccgtctattgatctggctattacagtagccatcgcttcc
agtttccgcgatgtagcaacggaagccggagatgtgattattggcgaagtaggactgacc
ggagaaataagacgggtctcacgaattgaacaaagagttatggaagcagcaaaacttggc
ttcacgcgcgttattgtcccgcagaaatgtctggaaggctggaaggcaccatccggcatc
caggtagtcggagtcaaaaccgtagcagaagcccttgaagtgacgttaggagggaaaact
agtggaacaccatcgttcgaattatga
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