Alkalicoccus halolimnae: FTX54_004030
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Entry
FTX54_004030 CDS
T09800
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ahal
Alkalicoccus halolimnae
Pathway
ahal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FTX54_004030 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahal03019
]
FTX54_004030 (groL)
03110 Chaperones and folding catalysts [BR:
ahal03110
]
FTX54_004030 (groL)
03029 Mitochondrial biogenesis [BR:
ahal03029
]
FTX54_004030 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ahal04147
]
FTX54_004030 (groL)
Enzymes [BR:
ahal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FTX54_004030 (groL)
Messenger RNA biogenesis [BR:
ahal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FTX54_004030 (groL)
Chaperones and folding catalysts [BR:
ahal03110
]
Heat shock proteins
HSP60 / Chaperonin
FTX54_004030 (groL)
Mitochondrial biogenesis [BR:
ahal03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FTX54_004030 (groL)
Exosome [BR:
ahal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FTX54_004030 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FTX54_004030 (groL)
Exosomal proteins of breast cancer cells
FTX54_004030 (groL)
Exosomal proteins of colorectal cancer cells
FTX54_004030 (groL)
Exosomal proteins of bladder cancer cells
FTX54_004030 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
NNH2
Toprim
Motif
Other DBs
NCBI-ProteinID:
WWD80735
UniProt:
A0A5C7FLF7
LinkDB
All DBs
Position
895917..897551
Genome browser
AA seq
544 aa
AA seq
DB search
MAKDIKHGEDARRSLVRGVDRLADTVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDNFENMGAQLVSEVASKTNDIAGDGTTTATVLAQAMIKEGLKNVTSGANPMVIRRGIE
KATEAALEELKNISEPIEGRESISQVASISASDDTVGQLIAEAMERVGNDGVITVEESKG
FGTELEVVEGMQFDRGYASPYMVSDSDKMEAVLEDPYILVTDKKIGNIQEVLPVLEQVVQ
KSKPILIISEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIAALTGAEVIT
EELGLDLKSADITQLGRASKVVVSKDNTTIVEGGGDSAKIADRVNQLRSQIEETTSDFDR
EKLQERLAKLAGGVAVVKVGAATETEMKEKKLRIEDALNSTRAAVEEGIVAGGGTSLINV
LTKLRSLGLEGDEATGASIVFRALEEPVRQIAENAGLEGSIIVERLKGESVGIGFNAATG
EYVDMIKAGIVDPTKVTRSALQNAASVSAMFLTTEAVVADFPEEEGSGGGMPDMGGMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaagcacggtgaagacgcacgccgctcgctcgtacgcggagtggac
cgtctagcagatacagttaaagtaacgctcggaccgaaaggacgcaacgtcgttcttgag
aagaaattcggatctccactcatcaccaacgacggtgtcacgatcgcgaaggaaattgag
cttgaggacaatttcgaaaacatgggcgcccagctcgtatcagaagttgcttccaagaca
aacgacattgccggtgacggtacaacaacagcaaccgttcttgctcaggcgatgatcaag
gaaggcctgaaaaacgttacgtcgggcgctaacccgatggtgatccgccgcggcatcgaa
aaagcaaccgaagcagcactggaagaactgaaaaacatctccgagccgattgaaggccgc
gagtcgatttcccaggtagcttctatttccgcatccgacgacacggtcggccagcttatc
gcagaagcaatggagcgcgtcggcaatgacggtgttattacggtagaagagtccaaaggt
ttcggtacagagcttgaagtcgtggaaggtatgcagtttgaccgcggttacgcttctcct
tacatggtaagcgactccgacaaaatggaagcggttcttgaagatccgtatatccttgta
acagacaagaaaatcggcaacattcaggaagtacttcctgttcttgagcaagtcgtacag
aagagcaagccgatcctgattatttctgaagacgtggaaggcgaagcgcttgcgacactt
gttgtcaacaagctgcgcggcacgttcaacgccgtagctgttaaagcaccaggctttggt
gaccgccgtaaagcaatgcttgaagacattgcagcacttacaggtgcggaagtaatcacg
gaagagctcggtcttgatcttaaatctgcggacatcacgcagcttggccgtgcatccaaa
gtggttgtatccaaagacaacacaacgatcgtggaaggcggcggcgactctgcgaaaatt
gcagaccgcgtcaaccagctccgctcccagatcgaagaaacaacatccgacttcgaccgt
gaaaagcttcaggagcgccttgcgaagcttgcaggcggcgtagccgttgtaaaagtcggt
gcagcaactgaaacagaaatgaaagagaagaagctccgcatcgaggacgctcttaactcg
acacgcgcagcagtggaagaaggtatcgtagccggtggtggtacgtcccttatcaacgta
ctcacgaagcttcgttccctcggccttgaaggcgacgaagcaactggtgccagcatcgtc
ttccgtgctcttgaagagccggtacgccagatcgcagaaaacgcgggtcttgaaggctcc
atcatcgttgagcgccttaaaggcgaatccgtcggcatcggcttcaacgccgcaactggc
gagtacgtcgacatgatcaaagccggtatcgtcgacccaacaaaagtaacacgctctgcg
ctgcagaacgcagcatccgtatccgctatgttcctaacgacagaagcagtcgtcgcggac
ttcccggaagaagaaggatccggcggcggcatgcctgacatgggcggcatgggcggtatg
ggcggcatgatgtaa
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