Alkalicoccus halolimnae: FTX54_004220
Help
Entry
FTX54_004220 CDS
T09800
Name
(GenBank) GntR family transcriptional regulator
KO
K24967
GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
Organism
ahal
Alkalicoccus halolimnae
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ahal03000
]
FTX54_004220
Transcription factors [BR:
ahal03000
]
Prokaryotic type
Helix-turn-helix
GntR family
FTX54_004220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_36
HTH_11
HTH_DeoR
DnaD_N
TrmB
HTH_41
Rrf2
RP-C
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WWD80770
UniProt:
A0AAJ8N2Q9
LinkDB
All DBs
Position
complement(948797..949504)
Genome browser
AA seq
235 aa
AA seq
DB search
MNQKQKKLPLYVQIKNKLTANIKDGTWKPGDSLPSESQMIEQYNVSRTTIRQAIRELVQN
GTLEISRGAPAKVKKIPEEGIGNPGIIHHETGTEMSVIILRMEKSQAHYAAKYQLSLPET
AEVFFMERLRIADGSPIAVQRSYFPLEVGQAVEEAANKEFDYFPALGEHGIHHKNIKEHV
SAANAAPYEADLLGITPGEALITIERTTLGIDAAPIEYSLTKYTPKAFNYTIEIE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaaacaaaagaaactgcccttatatgttcaaataaaaaataagttaacagcc
aatataaaagacgggacctggaaacccggagattcgctcccttctgaaagtcagatgatt
gagcagtacaacgtcagccgtacaacaatcaggcaggcgatacgggaactggtgcagaac
ggcacgctggagataagccgcggggctcctgcaaaagtgaaaaaaataccggaggaaggt
atcggcaatcccggaatcatccaccatgaaaccgggactgagatgtctgttattattctc
cgtatggaaaagagccaggcacattacgctgccaaatatcagctttccctcccggaaacg
gcagaggttttctttatggagcggctgcgtattgctgatggcagcccaatcgctgtccag
cgttcctactttcccctcgaagtcggacaagcagtcgaagaagcggccaataaggaattt
gactatttccccgctttgggagagcacggaattcatcacaaaaacataaaagaacatgtc
tccgcagcaaacgctgcaccttatgaagccgacctgctcggtattacaccgggagaagct
ttaattaccattgaaagaactacgctcggtatagacgccgctcccattgaatacagtttg
acaaaatatacgcctaaagcatttaactatacgattgaaattgagtag
DBGET
integrated database retrieval system
