Alkalicoccus halolimnae: FTX54_005240
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Entry
FTX54_005240 CDS
T09800
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ahal
Alkalicoccus halolimnae
Pathway
ahal02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FTX54_005240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ahal02000
]
FTX54_005240
Transporters [BR:
ahal02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FTX54_005240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
AAA_22
AAA
Zeta_toxin
AAA_15
AAA_30
AAA_23
AAA_16
SRP54
SecDF_P1_head
RsgA_GTPase
AAA_29
ABC_membrane_2
APS_kinase
EI24
DEAD
nSTAND3
AAA_7
AAA_28
ResIII
AAA_25
DO-GTPase2
ABC_membrane_3
Motif
Other DBs
NCBI-ProteinID:
WWD80968
UniProt:
A0A5C7F384
LinkDB
All DBs
Position
1193780..1195588
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AA seq
602 aa
AA seq
DB search
MRNEWTEPFRQPKLNTDPDSTEKKKRAEDWQGTLKRIWSYLMAHRRMLFMVILMITLSSL
LALAGPLIVGLSIDNFLVDGNMEMIVYVLLALGVVYILHAATVFLQHFWMVSISQKTVYT
IRTGLFDHMQKLPIPFFDRRQHGELMSRLTNDIENISNTLNSSVIQIFQSVLTLAGILIV
MLYLSPLLTLITLIIVPLMIAGMKWITKRTGPLFKAQQQNLGEMNGYVQETMSGQRIIKS
FSQEERVMREFDEKNQNLRLSGFWAQTISGFIPKLMNMLNNVSFAVIAGVGGLLALQNMV
TIGVIVIFAEYARQFTRPLNDLANQFNVLLSAIAGAERVFSIMDEKDELHEDEGTEELPI
SEGRIAFENVRFGYGEEVTINNVSFAADKGETVAFVGPTGAGKTTIISLLSRFYDPDQGA
ILIDGKDIRQVKKESLRRHMAFVLQDSFLFAGTIRENIRYGKLQAADKEVEQAAELANAY
SFIAKMPDGFDTKIDAEGGGISQGQKQLLSIARALLADPAILVLDEATSSIDTITELKIQ
EALRRLMHGRTSIVIAHRLNTIREADHIIVLQEGSVTEAGSHEQLLETKGFYADLFYSQK
LS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaatgaatggacggagccgttccgtcagcctaaattaaatactgatccggattcg
actgagaagaaaaaacgtgcggaggactggcagggcacattgaaacggatctggtcctac
ttaatggctcaccggcggatgctgtttatggtcatccttatgattacgctgagttctctg
cttgctctcgctggtccgcttattgtaggtctttccatcgacaattttctcgtcgatgga
aacatggaaatgattgtttatgttcttctggctctaggtgtcgtgtatattctccacgca
gcgactgtgtttcttcagcatttctggatggtaagtatttcgcagaaaacggtctacacg
atacgcaccgggcttttcgatcacatgcagaaacttccgattccttttttcgaccgcaga
cagcatggagagttgatgagcagactcacaaatgacatagagaacataagcaatacgctg
aacagctctgtgattcagatttttcagagtgtcctcactcttgcaggcattcttatcgtc
atgctttacttaagcccgctgttaacgcttattactctaataattgtcccgttgatgatt
gctggaatgaagtggattacgaagcgtacagggccgctttttaaagctcagcagcaaaat
ctcggggagatgaacggatacgttcaggaaacgatgagcggccagcggattattaaatcc
ttctctcaggaggagcgggtcatgcgggagtttgacgaaaaaaatcaaaacctgcgcctc
tccggcttctgggctcagacgatctccggctttattccaaagctgatgaatatgcttaat
aatgtcagttttgctgtcattgctggggtgggaggcctgcttgctcttcaaaacatggtg
acgataggtgtcattgtcatatttgctgagtatgcccggcagtttaccaggccgctgaac
gacctggctaaccagttcaatgtcctgctttccgccatcgcaggagcggagcgcgttttt
tccattatggatgaaaaagatgaactgcatgaagatgaaggaacagaagagcttccgatt
tccgaagggcggatagcattcgaaaatgtgcgtttcggatacggagaagaagtaaccatc
aataatgtttcttttgctgcggataaaggggagacagtagctttcgtcggtccgaccgga
gctgggaaaacaactatcatcagcctgctttcccgcttttatgatccggatcagggagcg
attttaatcgatggaaaagatatccggcaggtaaaaaaagaatcgctgcgcagacatatg
gcttttgtgctgcaggattctttcctgtttgcaggtacgatccgggaaaacatccgctac
ggaaaactgcaggcagcggataaagaagttgagcaagcagctgaactggcgaatgcctac
tcgtttatcgcgaaaatgccggatggttttgatacgaagattgatgcagaagggggtggg
atcagccaggggcagaagcagctgctgtctatagcaagagctcttctggccgatccggcg
attctcgttcttgatgaagccacgagcagtattgatacgattacggagttgaaaattcag
gaagcgctgcgccgcctgatgcatggaaggacaagcattgtcattgcccaccgactgaat
acgatccgggaggcagaccatatcattgtcctccaggaaggaagcgtaacggaagcaggg
agccacgagcagcttcttgaaacaaaaggtttttatgctgatctgttttacagccagaag
ctgtcttaa
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