Alkalicoccus halolimnae: FTX54_005325
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Entry
FTX54_005325 CDS
T09800
Name
(GenBank) DEAD/DEAH box helicase
Organism
ahal
Alkalicoccus halolimnae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
DUF5659
Motif
Other DBs
NCBI-ProteinID:
WWD80985
UniProt:
A0A5C7F6R1
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All DBs
Position
1215870..1219112
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AA seq
1080 aa
AA seq
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MRLDELSEEDLKHEQHVSEQLKIARVYKDEKSVKEIFWDYEKKHFRINVERYRQTFTVDI
KPDHQLNITSVSCSCGRGSRLCVHVLTAFLQMNEYDTASWLTNREAEYKKPVTGGLSRRE
TEQTARVLQSFESLFIPGQEYETTEGREELTVQYAVKLYPSYYEHVPGTIEVELKIGVGK
LYIVKDIRELLEAIDNGDALRFTKLFTYHPADHTFKERDAAMLDRIRELMDVQTMHSTFY
ERNKESRRSFEIPSPYALEFLKDLSEMNTIVDDQVREYASLHMEELPKPFEFSVRKAENE
DGLYQLYWSKAHELLYFGAAAKLCFYKGVFYYTSGEKLRILHTLYYTLALEDAAKLSFTD
DHLEQLASVLLPQLREVGRVEMDEAIEAGIDMPPLKPKLKLQHEDRKMTASVVFQYGEKT
IDPFKEEPLKTETVLVRDMKQEYRLLALIEEAPFKYNGEDLFLDSLADILYFMSSWLPVL
SESFEVYAPKSLQKLLYEPDMEPQLEASVAPEGGWMDISFDFEGISDSEVTEVMKALVRR
ENFYQLDSGAYVPLQGEAFQGVRSLVEDLDMKESDMKEEMQIPLYKAFQLDDADFVPVKK
SAEFKQLLTRLLEPEEHDFELPDDIDASLRDYQKRGYQWMTSLDYYGFGGILADDMGLGK
TLQTITFLAGKKARQSVKDPVLIICPSSVIYNWQKEIERFAPNLSSVIVTGSKAERDAQF
AGIDQYDICITSYPVLRRDEEMYAAKRFSTLILDEAQYVKNSITKTAKAVRSIESGTSFA
LSGTPIENSLEELYSIFRIVLPGVFPKREIFRNMQEDSIAKRIRPFILRRQKQEVLKELP
EKLETVEYTNMTQEQKTLYLGQLKLLQKEASDAIARNSWQENRMQILAGLTRLRQICCHP
GMFVPSYDGGSDKLERLMEYTAEARKNGHRIVVFSQFTKMLAIMKERFDEAGADYFYLDG
NTPAKDRLTMADRFNDGEKEMFLVSLKAGGTGLNLTGGDTVILFDSWWNPAVEDQAADRV
YRFGQKRVVQVTKMVTTGTIEEKIHELQEKKRNLLDRVVHSGETMISSLGKEEIEELLEI
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcttgatgaattgagtgaggaagatttaaagcatgaacagcatgtttcggagcag
ttgaagattgcccgtgtatataaagatgaaaaaagtgtaaaggaaattttttgggactat
gagaaaaaacatttccggatcaatgtggaaaggtacagacagacgtttactgtggacatt
aagccggatcatcagttgaatattacgtcggtttcctgttcctgtggaagaggcagcaga
ctatgtgtgcatgtactcaccgcctttctgcagatgaatgagtacgatacagcttcctgg
ttaacaaacagggaagcggaatataagaaacctgtaacgggaggcctttcccgaagagaa
acagagcagacggccagagtactccagtcatttgaatccctttttattcccggacaggaa
tacgaaacgacagaaggcagagaagagcttaccgtgcagtatgcggtgaagctttaccct
tcctactatgaacatgttcctggaacaattgaagtggagcttaaaatcggtgtcggaaaa
ctctatattgttaaagatattagagaactgcttgaagccatagataatggagatgcactc
cggtttaccaagctgtttacttatcaccctgcagatcatacattcaaggaaagagatgct
gcgatgctcgacagaatcagagagttaatggatgttcaaacgatgcacagcactttttat
gaaagaaataaagagtcgaggcggtcgtttgaaattccttcgccttatgccctcgaattc
ctgaaggatctttctgaaatgaatactatcgtggatgaccaggtgcgcgagtatgccagt
ttacacatggaagaactgccgaagccatttgaattcagcgtccgaaaagcagaaaatgaa
gatgggctttatcagctttactggtctaaagctcacgaactgctttattttggagctgca
gctaaactctgtttttataaaggagtattttattacacttcgggagagaaactgcggatc
ctgcacaccctctactatacgctggcgctggaagatgcagcaaagctgtcctttaccgac
gaccatctggaacagctcgcttccgtcctgcttccccagctgcgggaagtagggagagtg
gaaatggatgaggcaatcgaagcgggtattgatatgccgccgcttaaacctaagttaaag
cttcagcatgaagaccgcaaaatgacggcttctgttgtttttcagtacggtgagaaaacg
atcgatccttttaaagaagagcctttaaagacggagacggtgctggtcagggatatgaaa
caggagtaccggctgctcgctctgattgaggaagcaccgtttaagtataatggggaagat
ctgttcctcgactcgttagctgatattctctactttatgtcctcgtggcttcctgttctg
tcggaatcatttgaagtatatgcaccgaagtctcttcaaaagctcctttatgaaccggat
atggaaccgcagctcgaagcgagcgttgctccggaaggcggatggatggacatctcgttt
gattttgaaggaatatccgactctgaagtcacagaagtgatgaaagcactcgtccgaaga
gaaaacttctatcagcttgactccggtgcctatgtaccgctgcagggagaagcttttcag
ggagtccgatcccttgttgaagatctcgatatgaaagaaagtgacatgaaagaagagatg
cagatccctctttacaaagcttttcagctggacgatgctgattttgttccagttaaaaaa
agtgcagagttcaaacagctgctgacacgtcttctggaaccagaagagcacgattttgaa
ctccccgatgacatcgacgcttccctgcgtgactatcaaaagcgtgggtatcagtggatg
acttctttagattactacggattcggcggaatactggctgacgacatgggtttaggaaaa
acgctgcagacaatcacgtttttagccggtaaaaaagcgcggcagtcagttaaagatccg
gtgctgattatctgcccgtcgagcgtcatctacaactggcagaaggaaatagaacgattt
gcaccaaatctttcctctgtgatagtcaccggttcgaaagccgagcgtgatgctcagttt
gcgggaattgatcaatacgacatctgtattacttcttatccggtgctgcgcagagacgaa
gagatgtatgcagcgaagcggttttccacgcttatccttgatgaagcacaatatgtgaag
aattcgatcacaaaaacggcgaaagcagtccggtcaattgaaagcggaacgagttttgcc
ctgagcggtaccccgatagaaaattcactcgaagagctgtattctatcttccgcatcgtc
cttcccggagtcttcccgaagcgggaaatcttccggaatatgcaggaagattcgattgca
aagcggattcgtccgtttattctccggagacaaaagcaggaagtgcttaaagagcttccg
gaaaaattggaaacggtcgaatatacgaatatgacgcaggaacaaaaaacactctattta
ggccagttgaaactgcttcagaaggaagcatcggatgctattgcgagaaactcctggcag
gaaaaccgtatgcagatactcgcagggctgacgagactgcgccagatctgctgccatcca
ggcatgtttgttccttcttatgatggcggatcagataaactcgagaggttgatggagtat
actgctgaggccagaaaaaatggtcatcgaattgtggtgttcagtcagttcacaaaaatg
ctcgctatcatgaaggaacgttttgatgaagccggggcagattacttttatctggacgga
aacaccccggctaaagaccggcttacgatggcagatcgattcaacgatggagagaaagag
atgtttttagtttctctgaaagccggaggaacaggattgaatctgacgggaggcgacacg
gtcatcctctttgattcgtggtggaacccggcagtagaggatcaggcggctgaccgcgtg
taccggttcggtcaaaagcgggtcgtgcaggtgacgaaaatggtaacgaccggtactatt
gaagaaaaaattcatgaactgcaggagaaaaagcgcaacctgctcgaccgcgtagttcat
tctggggagacgatgatttcctctttaggcaaagaagaaatcgaagaacttctcgaaata
taa
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