Alkalicoccus halolimnae: FTX54_005425
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Entry
FTX54_005425 CDS
T09800
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ahal
Alkalicoccus halolimnae
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahal03400
]
FTX54_005425
Enzymes [BR:
ahal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FTX54_005425
DNA repair and recombination proteins [BR:
ahal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FTX54_005425
Prokaryotic type
FTX54_005425
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WWD81005
UniProt:
A0A5C7FI05
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All DBs
Position
complement(1241927..1243366)
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AA seq
479 aa
AA seq
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MNETYVVWFRNDFRFHDNPAVHAALNEAQESDGNILFVFHLHPDFTGNTDLSNDYFFQTV
RDFAEECEKINVKLHIISGTPKEAFDLLTERVGVINTVYHARDFTPFALQRDEEVRHTLQ
KHRIRLESVRGNYIHEPFEITKNNEEPYKVYTPYSRQWLRAEKTSLVQSDPDDISRFYGR
IKAVDAESEKTFSTILNNCSSNWKKIGEKAALHRLEFFIKNVLSRYHHTRDLPEKAGTSR
LSPYLRTGTLSVRQVYNAAAVQLEGKNNEGPETFIKELAWRDFYTMILTHFPETAEKEFQ
EKYRDLSWNNNQDHFSLWKQGMTGFPIVDAGMRQLNQIGWMHNRLRMITASFLTKDFQMD
WRLGEKYFGEKLIDYDPASNIGGWQWAGSVGTDAVPYFRVFSPVRQSERFDPDGSYIRRY
VPELKDVPDKFIHEPHKMPADIQDKASCRIGKDYPEPIVDHKQERKRAIAMFKEEGELL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacttatgtagtctggttcagaaacgattttcgtttccatgataacccggct
gtacatgccgcactaaatgaagctcaggaatccgatgggaatattctgttcgtatttcac
cttcatcccgatttcacaggcaatacagacttaagcaacgattacttttttcagactgtc
cgtgattttgcagaggaatgtgaaaaaataaacgtcaaacttcatattatttccggtact
ccaaaagaagcttttgaccttctgactgaaagagtcggtgtaattaacactgtttatcat
gcacgcgactttacaccattcgctctgcagcgagatgaagaagtccgtcatactctgcaa
aaacacagaatccgccttgaaagcgtgcgaggcaattatatacatgaaccctttgaaatt
acaaagaataacgaggaaccctataaagtgtacacgccttattccaggcagtggctccgt
gcggaaaaaacttctttagtccaaagtgatccagacgacatatcccgcttttacggaagg
attaaagctgtggatgctgaaagtgaaaaaacattttcaactatccttaataactgctcc
tccaactggaaaaaaattggtgaaaaagcggctcttcaccggcttgaattttttataaaa
aatgtcctttcccgctaccatcataccagggatctgcctgaaaaagcaggcacaagccgt
ttgtccccctaccttcgcacagggactctttctgtacgacaggtatataatgcagctgct
gtacaactggaaggtaagaacaatgaagggccggaaacctttataaaagaattggcgtgg
agagatttttacacaatgattttaactcatttccctgaaaccgctgagaaagaatttcag
gaaaaataccgtgacttgagctggaacaacaaccaagatcacttttctctctggaaacag
gggatgacaggctttcctattgtcgatgcaggtatgagacagctgaatcaaataggatgg
atgcataaccgtcttcgtatgattactgcttcttttttaacaaaagattttcagatggac
tggcgtctgggggaaaagtatttcggagaaaagcttattgattacgatccagcctcaaac
atcggcggctggcagtgggccggttctgtcggtactgatgcagttccttattttcgtgtt
ttcagcccggtacgccagtcggaacggtttgatccagatgggtcctacatccggcgctac
gttccggagctgaaagatgtgccggacaagttcatccatgaaccacataagatgccggcc
gacattcaggataaagcttcctgcaggatcggaaaagattaccctgaaccaatcgttgat
cataagcaggaaagaaagcgcgctattgctatgttcaaagaggagggggaactgttatga
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