KEGG   Alkalicoccus halolimnae: FTX54_006400
Entry
FTX54_006400      CDS       T09800                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ahal  Alkalicoccus halolimnae
Pathway
ahal03030  DNA replication
ahal03430  Mismatch repair
ahal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ahal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FTX54_006400
   03430 Mismatch repair
    FTX54_006400
   03440 Homologous recombination
    FTX54_006400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ahal03032]
    FTX54_006400
   03400 DNA repair and recombination proteins [BR:ahal03400]
    FTX54_006400
Enzymes [BR:ahal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FTX54_006400
DNA replication proteins [BR:ahal03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FTX54_006400
DNA repair and recombination proteins [BR:ahal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FTX54_006400
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: WWD81176
UniProt: A0AAJ8N3P4
LinkDB
Position
complement(1431506..1432144)
AA seq 212 aa
MNFTAIDFETASSEKGSACAVGLVRVDNSEVKEEVYSLIKPASPYFDPACVRVHGLTWED
VRTAPTFADLWPQLKPLLSGRLILAHNASFDLKVLKSALDAYDLPYPEASYNCTVQIAKK
TWPEFYNYKLSTIAYELDISFKHHHALEDAQAAAEIMLRAEEIHNAFDEATFLKRLRMSN
GSLFPGLSTTPGANQKRKKLALSAESEKKEAF
NT seq 639 nt   +upstreamnt  +downstreamnt
gtgaattttactgccatagattttgagacagcttccagtgaaaaagggagcgcctgcgct
gtcggacttgttagagtggataacagtgaagtaaaagaagaagtatacagtcttattaag
ccggcttctccatacttcgatccagcctgtgtgcgcgttcacggactgacgtgggaagac
gtgcgcacagctcctacctttgctgacctgtggccgcagttaaaacctctcctttccggc
cggttgattcttgcccataatgccagttttgatctgaaggtacttaaatctgctttggat
gcctacgaccttccttatccggaagcctcatataactgtactgttcagattgctaaaaaa
acctggcctgaattttataattataagctttctacaattgcttacgaacttgacatttct
tttaaacaccatcacgcactggaagatgctcaggcagccgcagaaattatgcttcgcgcg
gaagagattcataatgcttttgatgaagcaacctttctcaaacgtctcagaatgtcgaat
ggttctctatttccaggcctgtctacgaccccgggagcaaatcagaaaagaaaaaaactg
gctctttcagcagaatccgaaaaaaaagaagccttttag

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