Alkalicoccus halolimnae: FTX54_007015
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Entry
FTX54_007015 CDS
T09800
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ahal
Alkalicoccus halolimnae
Pathway
ahal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FTX54_007015 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahal03400
]
FTX54_007015 (recO)
DNA repair and recombination proteins [BR:
ahal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FTX54_007015 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FTX54_007015 (recO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
ArfGap
MC5
zf_Tbcl_Rhp7
Motif
Other DBs
NCBI-ProteinID:
WWD81292
UniProt:
A0A5C7FGK9
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All DBs
Position
1558636..1559400
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AA seq
254 aa
AA seq
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MLQKVEGIVLRTTDYGETNKIITIYSRENGKTALMARGAKKTKSRFSSATQPFVFGVFIF
YQSKGMGSLNQADIVDSFRYIRSDLMKTAYASYAVELLDKLTEDKEPNRPLFDLLFQIFD
HINKGDDPEVLIRLFETKMLYLSGAPPELRACVNCGNMDNIAVFSLSYGGVLCSECANME
TRPVPAGAHTLKLLKLFQQINPSRIGTIKVKKETKDEMKVLLEAYYEEYVGVYIKAKRFI
KQMEELEQRNVDTD
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaaaagtcgaaggaattgttctgcgtaccaccgattatggagaaactaataaa
ataataacgatctattccagggaaaacggaaaaacggcgctcatggcccgtggggctaag
aaaaccaaaagccgcttttcttcagctacccagccgtttgtgtttggagtttttattttt
taccagtccaaggggatgggcagcttaaaccaggcggacatcgttgattcgtttcgctac
atcagaagtgatctgatgaaaaccgcctacgcttcatatgcggtggaactgctcgacaaa
cttacggaggataaagaaccgaaccggccgttatttgacctgctgtttcagatatttgat
catataaataaaggagatgatccggaagttctgattcggcttttcgaaacaaaaatgctt
tatctatccggagctccaccggaacttcgggcatgtgtaaactgcggaaatatggataat
atagccgttttttcactatcctacggaggagtattgtgcagcgaatgtgcaaatatggaa
accaggccggttcctgcaggagcacacacgcttaaactccttaagctctttcagcagatt
aatccctcccgaattggaacaattaaggtgaaaaaggaaacgaaagacgaaatgaaagtt
ttactggaagcctattatgaagaatatgtcggggtctatataaaagcgaaaagatttata
aaacaaatggaagagcttgaacagagaaatgttgacacggattaa
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