Alkalicoccus halolimnae: FTX54_007160
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Entry
FTX54_007160 CDS
T09800
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
ahal
Alkalicoccus halolimnae
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ahal03000
]
FTX54_007160
Transcription factors [BR:
ahal03000
]
Prokaryotic type
Helix-turn-helix
XRE family
FTX54_007160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
SinI
HTH_31
HTH_19
HTH_25
HTH_26
HTH_37
Phage_CI_repr
KorB
TetR_N
6PGD
JmjN
DUF6331
SLT_4
HTH_IclR
DUF896
Sigma70_r4
MarR_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WWD81319
UniProt:
A0A5C7FGI0
LinkDB
All DBs
Position
complement(1589040..1589369)
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AA seq
109 aa
AA seq
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MIGARVREYRKARGLTMSELADRAGVAKSYLSAIERDLQSNPSIQFLEKIASVLDVNMNA
LLKDASAEDEAAALDDEWQQLISEAMNSGVSKEEFRDFLEYNKWKMKQK
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgattggagcaagagtccgggaatacagaaaagccagaggattgactatgagtgaactc
gccgatcgggccggagtcgctaaatcttatctcagcgcgatcgaaagagacctgcagtcc
aatccctccattcaatttctggaaaaaatcgcatctgtgctcgatgtaaatatgaatgct
cttttaaaagatgcttcagcagaagatgaagccgcagcgctggacgatgaatggcagcag
ctgatatctgaagcaatgaattcaggagtatccaaagaagaattccgtgattttctggaa
tataataaatggaaaatgaaacagaaataa
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