Alkalicoccus halolimnae: FTX54_007805
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Entry
FTX54_007805 CDS
T09800
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ahal
Alkalicoccus halolimnae
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ahal03009
]
FTX54_007805
Enzymes [BR:
ahal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
FTX54_007805
Ribosome biogenesis [BR:
ahal03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FTX54_007805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ntox25
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
WWD81431
UniProt:
A0A5C7FDB0
LinkDB
All DBs
Position
1713172..1713891
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AA seq
239 aa
AA seq
DB search
MERLQKIIAGAGITSRRKAEKLIEDGKVSVNGTIVKELGAKADVNSDEIVVDGMPLEKEE
PVYYLLYKPSGVISSVKDEAGRKVVTDYLPTEKRIYPVGRLDFDTSGVLIMTNDGEFANM
LMHPKYKVEKTYFAKVEGIPDKQKLQKLSRGIYLDGVKTAPAFVKLRKSENKKGTSIIEL
VIHEGRNRQVRRMLEEVGHPVLKLKRERYGILDLKGLNAGEYRELKPHEVKKLRELSVT
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggaaagactacagaaaattatagctggtgctggaattacttccaggcgaaaagctgaa
aaacttatcgaagatgggaaagtatctgtaaatggtaccatagtaaaagagctgggagcg
aaagccgatgttaacagtgatgaaatcgtagtggatggcatgcctcttgaaaaagaagaa
cctgtctattaccttctctacaaaccttccggagtcatttccagtgtgaaagatgaagct
ggaagaaaagtcgtcactgattatctccctacagagaaacgtatctacccagtaggaaga
cttgactttgatacttccggagtattgataatgactaacgatggagaatttgctaatatg
ctgatgcatccaaaatataaagtcgagaaaacctattttgcaaaggtagaaggaattcct
gataagcagaagctgcaaaagctcagcagaggaatttatcttgacggagtaaaaacagca
cctgccttcgtaaaactgcgaaaaagtgaaaacaaaaaaggtacatcaattattgagctt
gttatccacgaaggcagaaacagacaggtgcgccgcatgctggaagaagtcggacatccg
gttttaaagctgaagcgggaacgatacggtattctcgatttgaaaggattgaatgcggga
gaatacagagagttaaaacctcacgaagttaagaaactgcgtgaattgtctgtcacataa
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