Alkalicoccus halolimnae: FTX54_008470
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Entry
FTX54_008470 CDS
T09800
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ahal
Alkalicoccus halolimnae
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahal03400
]
FTX54_008470 (addA)
Enzymes [BR:
ahal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FTX54_008470 (addA)
DNA repair and recombination proteins [BR:
ahal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FTX54_008470 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
RHH_4
AAA_30
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WWD78476
UniProt:
A0A5C7FAN0
LinkDB
All DBs
Position
1853701..1857330
Genome browser
AA seq
1209 aa
AA seq
DB search
MEWIPKPEGVFWTDSQWEALAREEKPLLVAAAAGSGKTAVLVERIIRKITDEETAVDLNR
LLVVTFTNAAAAEMKQRVGKAIEKKITEQPASSHLRRQLSLLQRADISTLHSFCMQVIRT
YYYEVDVDPHFRMLDETEAQLLEEEVMEEMFETAYAEDKQFYMLVDYFTGDRTDEQLKKL
ILDLYHFSRSHPNPSAWLDSILEIYNNADQTSFNSLSWVKEAKSYITDSLKSAEAEYNRA
LAAARAPGGPYKYVELLEEEYAKIIKASAQGDWEDLYSCMQEITFKKMPSIKKADTDIDS
AQKEHVKLIRDKIKKQINELFTVYFSASPALIIDDMKSMAPVIQLLNKYVKNFSEQNQLA
KLEKNALHFSDLEHYCLNILSLKGNYSNPSNVALQYQAQLQEVLIDEYQDTNFVQEAILM
LLSGRKNLFMVGDVKQSIYRFRLAEPGLFLNKYKNYGKEEGVRIDLSQNFRSRGVIINSV
NYIFNQIMSESLGELDYDEAASLKQGNFSFPENDDKSSKIILVDPEKDKVYEEGEDELET
SQLEARATAQEIRRMIDRKFSVYDKETNASRPVKYRDIVILMRSMPWAETIIEECKNAEI
PIFADSSTGYFEAVEVKVMLSLLQIIDNPYQDIPLASVLRSPIFSYTEDELTEIRLFAEE
ADFYSALKEAAAADYLSTSDVVQKISSWRDAVKTKGLSEFVWQLFEETGYIEYVGGMPGG
KQRQANLRSLYDRARTYEQTSFRGLFRFLRFIERMRERGDDLGKARAIGEQEDVVRLMTI
HKSKGLEFPIVIIAGLNKQFNMMDLNNSYLKHKDMGLAARFIDPENRVSYPTMYFYVVKE
KLRREMLAEEMRILYVAMTRAEEKLIMTGTVKDFDSAINGWASHLGENGVPEEVRSRAKT
YFDWIMPALFNHPDAAETLTSAGVQPIKTDEDDSSWSIERIQASELISSAPAAVHQKQEL
LDKVVSGQAAGEDTSYVDRKFSWKYPHRKATVTEVKKSVTELKRFEEDAYSDRSWAPKEP
SFQRPAFIQTTSQSSAEIGTIMHAVLQYIDYQASSEKEIDMELGKMLAKELLTTEEADQV
DKKQLLDFLNSETGNHLKNALWIEREVPFTYSVPASRFYPDWEGEEEFLFVQGIVDCVYK
SQDRSLHILDYKTDKITGKFKDHTKAAESVRERYHFQLSLYREALESAWDTQIQSCGLYL
LEGRFYAGI
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggaatggatacctaagcccgagggcgttttctggacagattcccagtgggaagcctta
gccagggaagaaaagccgcttcttgtagcagcagcagccggaagtggaaaaacagcggtg
cttgtggaacgtattattcgtaaaataacggatgaagaaactgctgtggatttgaacagg
ctgctggttgtaacttttacaaatgcagctgcagcggaaatgaaacagagggtaggaaaa
gcaatagagaaaaaaattactgaacagccggcttcttcacacctgcgccgtcagctctca
ctgttgcagcgtgccgacatttccacacttcattctttttgtatgcaggtcatacgtacg
tattactatgaagtggacgtggatcctcattttcgaatgctggatgagacagaagctcag
cttttagaagaggaagtgatggaggagatgtttgaaactgcttatgcagaggataagcag
ttctatatgcttgttgattatttcacaggtgaccggacagatgagcagctgaagaaattg
attctcgacctttatcacttttcccggtcgcatccgaatccttcagcctggctggacagc
attcttgaaatttataataatgcagaccaaacttcctttaactccctatcgtgggtaaaa
gaagcgaaatcctatattaccgattccctgaaatcagcagaagctgaatataaccgtgcc
ctcgctgctgcgcgggctccgggaggtccttataaatatgtggaacttctggaagaggaa
tatgcaaaaattataaaagcatccgcacaaggagactgggaagatctttatagttgtatg
caggaaattacgtttaaaaaaatgccgtctattaaaaaagccgatacagatatagacagt
gctcaaaaagagcatgtaaaactcatcagggataaaattaaaaagcagatcaatgaatta
tttaccgtctatttttctgcttcccccgccttgatcattgatgatatgaaatcgatggcg
ccggtaatacagctgcttaataaatacgtgaaaaatttttccgaacaaaatcagcttgct
aaactcgaaaaaaatgcgctccatttcagtgatttagaacattactgtttgaatattctc
agtttaaaagggaattattccaatccttccaatgttgcgctgcagtatcaggcccagctg
caggaagtattgattgatgaataccaggatacaaactttgtgcaggaagctatacttatg
cttttatcaggaagaaaaaatttatttatggtaggagacgttaaacagtcgatttatcga
ttcagactcgctgagccaggcctttttctgaataaatataaaaattacgggaaggaagag
ggagtaagaattgatctttcccagaattttcgaagtagaggcgtgattatcaattcagta
aactatatctttaatcagatcatgagtgagtctcttggggaacttgattatgatgaagcc
gcatctttaaaacagggaaacttctcatttcctgaaaatgacgacaaaagttcaaaaatt
attctggtcgaccctgaaaaagataaagtatacgaagagggcgaagatgaactggaaacg
tctcagttggaagcaagagccacagcacaggaaatccgccgtatgatagatcgaaaattt
tcggtttatgataaagaaacaaatgcttccagaccggttaaatacagagatatcgttatt
ttaatgcgctctatgccatgggcggaaacgattatcgaagaatgcaaaaatgctgaaata
ccaatattcgcagattcaagtacaggatattttgaagcagtagaagttaaagtaatgctc
tctcttctgcagatcattgataatccataccaggatattcctttggcttctgttttgcgc
tcccccatattttcctacaccgaagatgaactgacggagataagactttttgctgaagaa
gctgatttttattcagctttaaaagaggcggctgcagctgactatctgtccacgtcggat
gttgtacaaaaaatttcctcatggagggatgcagtaaaaacgaagggactttcggaattt
gtctggcagctttttgaagaaaccgggtatatcgaatatgtaggagggatgccgggagga
aaacagcgtcaggctaatctccgctccctttatgatcgtgccagaacgtatgaacagact
tcttttcgaggattgtttcgtttcctgcgctttattgaaagaatgcgggaacgtggagat
gatcttggaaaagcgcgtgccattggagaacaggaagatgttgttcgtctgatgactatt
cacaaaagtaaaggcctggaatttccaattgtcattattgcaggattaaataagcagttc
aacatgatggatttaaataattcttatcttaaacataaggatatgggactggccgccaga
tttattgatcctgaaaacagagtttcgtacccaactatgtatttttatgttgtgaaagaa
aaactgcgcagagaaatgcttgccgaagaaatgcggatcctttatgtggccatgacccgt
gctgaagaaaagctgattatgactggaactgtcaaagattttgacagtgctataaatgga
tgggcttcccatctgggggaaaacggggtgcctgaggaagtcaggtcccgggcaaaaaca
tattttgactggatcatgcctgctttatttaatcatcctgatgcggcagagacgcttact
tcagcaggtgttcagcccattaaaacagatgaagatgattcttcctggtcaattgaacgc
attcaagcttctgaattgatctcttcagctcctgcagccgtccatcaaaaacaggaactg
cttgataaggtagtgtcaggacaagcagcaggggaagatacgtcgtatgtcgatcgtaaa
ttttcatggaagtatcctcaccgaaaagctacagtaacggaagtgaaaaagtcagttacc
gagctgaaaagatttgaagaagatgcttactctgatagaagctgggcgccaaaggaaccc
tcttttcaacgcccggctttcatacaaaccacttctcaatcctctgctgagatagggact
attatgcatgctgttcttcaatatattgattatcaggcatcttcggaaaaagagattgat
atggaattggggaaaatgctggcgaaagagctccttacgacagaagaggctgatcaggtg
gataaaaaacagctccttgattttttaaactcagaaactggaaatcacttaaaaaatgca
ctctggattgaacgagaagtgccattcacctatagtgtgcctgcatcccgattttatccg
gattgggagggagaagaagaatttctttttgtacagggaattgttgactgtgtttacaag
agtcaggatcgttcacttcacatactcgattacaaaacggacaaaataacaggtaaattt
aaagatcatacgaaggcagctgaatctgtaagagaaagatatcattttcagctttctctt
tacagagaagcattggaatctgcttgggacacacaaattcagtcgtgcgggctttattta
ttagaagggcggttttacgctgggatatag
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