Alkalicoccus halolimnae: FTX54_009110
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Entry
FTX54_009110 CDS
T09800
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ahal
Alkalicoccus halolimnae
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahal03016
]
FTX54_009110 (miaB)
Enzymes [BR:
ahal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
FTX54_009110 (miaB)
Transfer RNA biogenesis [BR:
ahal03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
FTX54_009110 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
DUF7294
Motif
Other DBs
NCBI-ProteinID:
WWD78594
UniProt:
A0A5C7F9I1
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All DBs
Position
complement(2000374..2001912)
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AA seq
512 aa
AA seq
DB search
MNEEQRKQQTQADDAGHKKAVKDKDYSQYFETTYAPPSLKQAKKRGKEDIEIHYDFDVPE
DMQKIGEGKKFLIRTYGCQMNEHDSENMAGILMRMGFESTAVTEEADVILINTCAIRENA
ENKVFGEIGHLKNLKRDNPGLVIGVCGCMSQEESVVNRILQKHQQVDLIFGTHNIHRLPE
LLKNAIFGKEMVIEVWSKEGDIIENMPRARKGKIQGWVNIMYGCDKFCTYCIVPYTRGKE
RSRRPEDIIEEVRHLARSGYKEITLLGQNVNAYGKDLVDVNYGLGDLMDEIRKIDIPRVR
FTTSHPRDFDDHLIEVLAKGGNLVEHIHLPVQSGNNQVLKLMARKYTRESYVELAAKIKQ
AIPHASFTTDIIVGFPNETEEQFEDTMSLVREMEYDSAFTYIYSPREGTPAANMQDNVPH
EVKKERLARLNALVNDLSAEKNKSYAGQTMEVLVEGESKKNPDVLSGRTRTNRLVNFRGP
KTSIGEIVYVKITDAKTWSLNGELVETAEVNN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagaacagcgtaaacagcagacacaggcggacgatgctggtcataaaaaagct
gtaaaggataaagattactcacagtatttcgaaacgacttatgccccgcccagcttaaag
caggcgaaaaaacgggggaaagaagatatagaaattcattacgattttgatgtcccggaa
gacatgcagaaaattggagaagggaaaaaattcctcatacgtacatatggatgccagatg
aatgaacatgattcagaaaatatggcaggtatccttatgagaatgggttttgaatctacg
gctgtaacagaagaagcagatgtgattcttattaacacatgcgctatacgtgaaaacgcc
gaaaacaaagtgttcggtgaaatcggtcacctgaagaatttaaaacgcgataatcctgga
cttgtcatcggggtgtgcggatgtatgtcccaggaagaatctgttgttaaccgtattctg
cagaagcatcagcaggtggatcttattttcggtacacataatattcaccgtctgcctgag
ctgttgaaaaacgccattttcggcaaagaaatggttatcgaagtgtggtcgaaagaaggc
gacattattgaaaacatgccccgggcgagaaaaggcaaaatccaggggtgggtcaatatc
atgtacggctgcgataagttctgcacgtactgcattgttccctatacccgcggtaaagaa
cgaagccgccggccggaagatattattgaagaagtacgtcacctggcccgcagcgggtac
aaagaaataacgcttcttggacaaaacgtcaatgcgtatggaaaagaccttgtggatgtt
aattacggattgggagatcttatggatgaaattcgtaaaattgatattccccgcgttcga
tttacaacgagccatccccgtgatttcgatgaccacctgattgaagtactggccaagggc
ggaaacctagtggaacatatccatctcccggtacaaagcgggaacaatcaggtattaaaa
ctgatggcacggaaatacacaagagaatcgtacgtcgaactcgccgctaaaataaaacag
gcgattccccatgcatcttttactacagatattatcgtcggcttcccgaatgaaacagaa
gaacagtttgaagatacgatgtctttagtaagggaaatggaatacgacagcgcgttcacg
tatatttattctccgcgggaagggacgccggctgccaacatgcaggataatgtaccgcat
gaggtaaagaaagagcgtcttgcccggctgaatgccctggttaatgatctttcggcagaa
aaaaataaatcctacgcaggacagacaatggaagtactggtagaaggagaaagcaaaaag
aatccagatgttttaagcggcagaacgagaacaaaccggctcgttaatttccgcggtccg
aaaacgagcataggcgaaattgtctatgttaaaataacagatgcaaaaacctggtctctt
aatggagaactagtagaaactgcagaggtgaataattaa
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