Alkalicoccus halolimnae: FTX54_009235
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Entry
FTX54_009235 CDS
T09800
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ahal
Alkalicoccus halolimnae
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahal03016
]
FTX54_009235 (truB)
Enzymes [BR:
ahal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FTX54_009235 (truB)
Transfer RNA biogenesis [BR:
ahal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FTX54_009235 (truB)
Prokaryotic type
FTX54_009235 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WWD78617
UniProt:
A0A5C7FLU1
LinkDB
All DBs
Position
complement(2031764..2032684)
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AA seq
306 aa
AA seq
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MKSVGGVVPLWKPRGMTSFDAVKRVRHIYKTKRAGHTGTLDPDVEGVLPICLERATKLVE
YLTADQKVYEGEVTIGFSTETEDAGGEVVERTPVNSTITEEEADSVLADLQGELEQTPPM
YSAVKVKGKKLYEYAREGLDVARPVRTITIYSLERKSALIHEDGKVIFSFRAVCSKGTYI
RTLAVQIGEKLGYAAHMSDLIRTASGNFEKKDCITLEELEKMNDPQKAVISVENAVKHLP
GVIIDEELEKKVLQGGLLPLPKAAEAFTEPYFSLYNRNQELLALYKKDVKRDGMMKPEKM
IRTIDL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgttggtggagtagttccactatggaaaccgagaggaatgacctcatttgac
gcagtaaaacgggtgagacatatatacaagacgaaaagagccggtcatacagggacactg
gatcctgatgtggaaggtgtgctgccaatctgccttgagagggcaactaaactggtcgag
tatctgactgctgatcagaaagtttatgaaggggaagtaacaattgggttttcaacagaa
accgaagatgccggaggagaggtcgtggagcggaccccggtaaattcaacaattacagaa
gaagaagcggattcggttcttgcggatcttcagggcgaacttgaacagacaccgccaatg
tactctgcagtgaaagtaaaaggaaagaaattgtatgaatatgccagagagggtttggac
gttgcgcggccggtacgaacaatcactatttattctctggaaagaaagagtgcactgatt
cacgaagatggaaaagtgattttttcattccgagccgtctgcagtaaagggacgtatata
agaaccttagctgtgcagattggggagaagctgggatatgcagcccatatgtcagatctg
atccgtactgcatcaggaaattttgaaaagaaagattgtatcactcttgaggaactggag
aagatgaacgatccgcagaaagcagtgatttctgttgaaaatgcagttaagcatcttccc
ggagtaatcattgacgaagagttggaaaagaaagtactccaaggaggacttctgccgctc
cctaaagccgcagaggcatttacagaaccttatttcagtctatataatagaaaccaggag
ctgctcgctctttacaaaaaagatgtcaaacgggacggtatgatgaagccggaaaaaatg
ataaggacaattgacttataa
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