Alkalicoccus halolimnae: FTX54_009545
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Entry
FTX54_009545 CDS
T09800
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ahal
Alkalicoccus halolimnae
Pathway
ahal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FTX54_009545 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahal03400
]
FTX54_009545 (priA)
Enzymes [BR:
ahal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FTX54_009545 (priA)
DNA repair and recombination proteins [BR:
ahal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FTX54_009545 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PIF1
Helicase_C_2
Cas3-like_C_2
AAA_30
ADDB_N
Zn_ribbon_6
ATPase_2
AAA_19
SLFN-g3_helicase
T2SSE
D-Glu_cyclase
Motif
Other DBs
NCBI-ProteinID:
WWD78675
UniProt:
A0A5C7F9I8
LinkDB
All DBs
Position
complement(2093886..2096309)
Genome browser
AA seq
807 aa
AA seq
DB search
MIANVIVDVPSQAVDRIFDYSVPDEFAETITRGCRVHVPFANRPVQGFVIGLTDQSDIPV
SKLKPIQEQIDLIPPLTEELLQLAEKIKTETLSLHVAVLKAMLPQAMRAKYQKNLHLQTA
PETLEAVLQPFFKESSVMANWDEWRKEADEEEKKAAARAIRKGQLSVEPVVSTKDAAKKR
LVFGLAVKNEKAREEAETLKIKAPKQAAVLFYLADQDKDSLYTVQELETYGSKAALETLV
KKDLLHKQQAVVKRDPYEGREFTATGNLDLLPEQDVVLKEIIDCMESEQQRTFLLRGVTG
SGKTEIYLQAIERTLEEKKEAIVLVPEISLTPQMVNRFKARFGSRVAVMHSALSKGEKYD
EWKKIRDGEVDVVVGARSAIFAPFNNLGIIIIDEEHEASYKQEEAPRYHARSVAIMRAES
YACPVILGSATPSLESYARASKGVYRLLTMENRVNDAAMPAVTLVDMRDELRQGNRSMFS
DDLLERIEARRLKGEQTVLLLNRRGYSTFIMCRDCGYVPQCPHCDISLTYHRTSQALQCH
YCGYSETLPVRCPECDSDQIRFFGTGTQKVEEELRKQLQDIRIIRMDVDTTRKKGSHEKL
LTEFGNGGADILLGTQMIAKGLDFPNITLVGVLAADSMLHLPDFRASERTFQLLTQVAGR
AGRHKKTGEVLVQTYSPNHYSITEVKQHDYLSFYEKEMQIRKMGGYPPFYYIAMIQISHP
ELQKVVEVTEKMSSFLRSSLSETTKIFGPVASPIPRIKDRYRYQCMIKYKVEPKLTEVLH
DLMSSFQSDIARNDVQIIIDTNPYMMM
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgattgccaatgtaatagtggacgttccttctcaggcagtagaccggatatttgattat
tctgtacccgatgagtttgcagaaacaatcacccgtggatgccgcgtacatgttcctttt
gcaaaccgcccggtccagggtttcgtcatcggactcaccgatcaatcggatattccggta
tcaaagctgaagcctatacaggaacaaatagatttaataccaccgctgaccgaagaactg
ctgcagctggctgaaaaaataaaaaccgagacactgtctcttcatgtagccgtattaaaa
gctatgctgccccaggcgatgcgggctaaatatcagaagaacctgcatctgcagacagct
cctgaaacactggaggctgtcctgcagcctttttttaaagaaagcagtgttatggccaac
tgggatgagtggagaaaagaggcagacgaagaagaaaagaaagcagctgcgagagcgata
cgtaagggacagctttcggtggaaccggttgtctccacaaaagacgcggctaaaaaaaga
ctggtttttggacttgccgtaaaaaatgagaaggcgagagaagaggcagaaactctgaaa
ataaaagctcctaagcaggctgcagtacttttctatttagcagatcaggacaaagacagc
ctttatactgttcaggaattggagacttacggttccaaagcagcactggaaacactcgta
aaaaaagacttgttacataaacaacaggcagtagtcaaaagagatccttatgaaggcagg
gaatttacggcaactggtaacctggatctgcttccggaacaggatgtggtattaaaagaa
attatagattgcatggagtcggagcagcaaagaacgtttttgctgcgcggagttaccgga
agcggaaaaacagaaatctatcttcaggcaattgaacgcaccctcgaggaaaagaaagag
gccattgttctcgttccggaaatttctcttacacctcagatggtcaaccgttttaaagca
agattcggctcccgcgttgcggtgatgcacagtgctctttccaaaggtgagaagtacgat
gagtggaagaagataagagatggagaagtggatgtcgtcgtaggggcacgttccgctatt
tttgctccattcaacaatcttggaattatcattatagacgaagagcacgaagcgagctat
aagcaggaagaagcaccacgctaccacgcccggtctgtagcgattatgagggccgaaagc
tatgcctgcccggttatacttggaagtgcgaccccttcacttgaaagctatgcaagagct
agtaaaggagtatatcgtttattgacgatggagaacagagtaaacgatgcagccatgcct
gctgtcactcttgttgatatgagggacgaactgcgtcaggggaaccgttccatgttttcg
gatgatctgcttgaaagaattgaagcaagacgcctgaaaggagaacagactgttttactt
ctgaacaggcggggatattccacttttattatgtgccgtgactgcggttatgttccccag
tgtccgcactgcgatatttcccttacatatcaccggacgagtcaggctcttcagtgtcac
tactgcgggtactctgaaacgctgccagtcagatgtcccgaatgcgacagtgatcaaatc
cgcttttttggaacaggcactcagaaagtagaggaagagctgagaaaacagcttcaggat
attcgcattattcgtatggatgtagatacaacaagaaaaaagggctcccatgaaaagctg
ttaactgaatttggcaatggcggagcggatatactgcttggtactcagatgatagccaag
gggctggatttccccaatattactctagtaggggttctggcagcggattccatgcttcac
ctgcctgatttccgggcttcagaaagaacctttcaactgctcacgcaggttgcaggccgg
gcaggaagacataaaaaaaccggcgaagtgctcgtacagacttattcgccgaatcattac
agtattaccgaggttaaacagcatgattatctttctttttatgaaaaagaaatgcagatc
agaaaaatgggaggctatcctccgttttattacattgcgatgattcaaattagtcatccc
gagcttcagaaggttgtggaagtaactgaaaaaatgagcagttttcttcgctcttcgctt
tcagaaacgacaaaaattttcggcccggtcgcttctcccattccccgtattaaagataga
tatcgctatcaatgcatgataaaatacaaagttgaaccgaagcttacggaagtgcttcat
gacttaatgagctccttccaatctgatatagcaagaaacgatgtacaaataataatcgat
accaatccatatatgatgatgtag
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