Alkalicoccus halolimnae: FTX54_011000
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Entry
FTX54_011000 CDS
T09800
Name
(GenBank) hypothetical protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ahal
Alkalicoccus halolimnae
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahal03019
]
FTX54_011000
Messenger RNA biogenesis [BR:
ahal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FTX54_011000
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Ortholog
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GFIT
Motif
Pfam:
tRNA_anti-codon
HD
TraI_2
C2orf69
Motif
Other DBs
NCBI-ProteinID:
WWD78950
UniProt:
A0A5C7FDZ0
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Position
2397604..2398590
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AA seq
328 aa
AA seq
DB search
MIIEDLALLDQPNQQFQGFGLIRSAQLAQTKKGDPFYNLSIAKGKKEVPAKVWSELIAGQ
EEEVKEVLQEGRVIYFEGDTSTYQDQLQITVRNFRASKEDEVDTADFLEMAPERIESLQQ
ELEDYIALIVDPLIQEVVSSIYQKYKKPFSSYPAAVKNHHSFVGGLLYHTVCMIRLGLDV
SRRYPGINQDFIIGGITLHDASKVIEYTSYTAPQYSVPGEFIGHISMSSMLVDREVQKIL
SDRGEKAQLTKLEQEAVYQLQHCILSHHGRLEWGSPVEPKTLEAHVIHLIDMIDSRVNMI
ERGLADTPEGAFTKVFPLGKLYKPSMDE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgataatagaagatttagcgttactcgatcagccaaatcagcagtttcagggcttcggt
ctgattcgcagtgcccagcttgcccagacaaaaaaaggagatcctttttataatttaagt
atcgccaaaggaaaaaaagaagttcctgctaaagtctggagcgagctgatcgcaggacag
gaagaagaagtaaaagaagttcttcaggaaggacgagtcatttatttcgaaggagatact
tccacctaccaggaccagctgcagatcaccgtgcggaacttccgggcgtccaaagaagat
gaagtcgatacagcggatttcctggagatggctcccgaacggatcgaatccctccagcag
gagctggaagattatattgcactgattgtcgacccgctgattcaggaagtcgtctcatcg
atctatcaaaagtataagaaaccattttccagctatccggcagcagtaaaaaatcaccac
tcgtttgtcggcgggctgctttatcatactgtctgcatgattcgtctcggcctcgacgtt
tccaggcgctatcccggtattaaccaggattttattatcggaggcatcaccctgcatgat
gcatcgaaagttattgaatacaccagttatacggccccgcagtacagcgtaccaggagag
tttatcggccatatttccatgtcctccatgctcgtagaccgggaagtgcaaaaaatcctt
tccgaccggggagaaaaagcacagctcacaaagctggaacaggaagccgtctaccagctt
cagcactgcattctcagccaccacggcagactggaatggggctctcccgtagaacctaaa
acactggaggctcacgtcatccatctaatcgatatgatcgactcgcgtgtgaacatgata
gaacgaggtctagccgacactccggaaggcgccttcaccaaagtgtttccactcggcaaa
ttgtataaaccgtcgatggatgaataa
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integrated database retrieval system