Alkalicoccus halolimnae: FTX54_011530
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Entry
FTX54_011530 CDS
T09800
Symbol
sinI
Name
(GenBank) DNA-binding anti-repressor SinI
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
ahal
Alkalicoccus halolimnae
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ahal03000
]
FTX54_011530 (sinI)
Transcription factors [BR:
ahal03000
]
Prokaryotic type
Helix-turn-helix
XRE family
FTX54_011530 (sinI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SinI
HTH_3
HTH_31
HTH_19
HTH_26
HTH_25
KorB
Phage_CI_repr
DUF1611_N
Sigma70_r4
MarR
TetR_N
GH-E
HTH_37
TAFH
Motif
Other DBs
NCBI-ProteinID:
WWD81658
UniProt:
A0A5C7F8X2
LinkDB
All DBs
Position
2505692..2506024
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AA seq
110 aa
AA seq
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MVGEKIKMYRLEKGMNMSELAERAGVAKSYLSTIERDIQKNPSVQFLEKVAPVLDTDIYS
LLGISASNGSSGEELDEEWKELVGEAMNSGISKEEFSNFLEFSRWKMSQG
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atggttggggaaaaaattaaaatgtaccgtctggagaaaggtatgaatatgagcgagctg
gcagaacgtgccggagtcgcaaaatcctatttaagcacgattgagcgggatattcaaaaa
aatccttcagtgcagtttctggaaaaggtagcaccggttctggatactgatatttacagt
ttactgggtatttctgcttctaatggcagcagcggagaagagttagacgaagagtggaag
gaattagtaggagaagctatgaattcaggcatttccaaagaagaattcagcaattttctg
gagttcagcagatggaaaatgagtcaggggtga
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