KEGG   Alkalicoccus halolimnae: FTX54_012725
Entry
FTX54_012725      CDS       T09800                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ahal  Alkalicoccus halolimnae
Pathway
ahal03030  DNA replication
ahal03410  Base excision repair
ahal03420  Nucleotide excision repair
ahal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ahal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FTX54_012725 (polA)
   03410 Base excision repair
    FTX54_012725 (polA)
   03420 Nucleotide excision repair
    FTX54_012725 (polA)
   03440 Homologous recombination
    FTX54_012725 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ahal03032]
    FTX54_012725 (polA)
   03400 DNA repair and recombination proteins [BR:ahal03400]
    FTX54_012725 (polA)
Enzymes [BR:ahal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FTX54_012725 (polA)
DNA replication proteins [BR:ahal03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     FTX54_012725 (polA)
DNA repair and recombination proteins [BR:ahal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     FTX54_012725 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FTX54_012725 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 HHH
Other DBs
NCBI-ProteinID: WWD79275
UniProt: A0A5C7FK06
LinkDB
Position
complement(2750083..2752716)
AA seq 877 aa
MADKLVLVDGNSVAYRAFFALPLLNNEKGVYTNAVYGFTTMLLKILEEEEPAHMLIAFDA
GKTTFRHETYKEYKGTRQKTPPELAEQLPLMRDLVKAFNIAYEEVENYEADDIIGTLAKR
AEKEGWETKIFTGDKDLLQLVDEKIHVALLRKGITNVDTYDLKQLQEKYGLKPSQIIDMK
GLMGDSSDNIPGVPGIGEKTALKLLAAHDTLEGVYENIESVSGKKMKEKLVENEQQAVMS
KKLATILTEVPLKMTLEDLSLGERNTPALLELFRDLEFSSLIDRIDPDGGAAGEEQLEDV
EVQVIDDLDPSMLATPSALVIESLEENYHNATIVGGALANETGVYFLSPEVLAKSSTFKE
WAKDESQEKIVFNAKRAVVGLAWQDIPLEGVIFDGQMASYLIDPGAASHEMADIAKRKKG
MQVQRDETVYGKGKKMHVPEEAVLAQHVGRKAAAVLELKPDLEKELQENEQLELLTELEM
PLSIILGRMERHGVAIDKEELEKIGEGLTERLQEIETKIHDMAGTVFNINSPKQLGEILF
EKMDLPPLKKTKTGYSTSADVLEKLQDQHEIIPEILLYRQLSKLNSTYIEGLIKAIHNKT
GKIHTMFNQALTQTGRLSSTEPNLQNIPIRLEEGRRIRHAFVPSKDNSYILAADYSQIEL
RVLAHISGDENLIEAFRHGMDIHTKTAMDVFEVEEAKVTSAMRRTAKAVNFGIVYGISDY
GLSQSLGITRKQAQSFIDKYLESYPGVSEYMDSSIEEAREKGYVTTMMNRRRYLPEITSR
NFNLRSFAERTAMNTPIQGSAADIIKKAMVDMDKAMDKEKTKAVMLLQVHDELIFEVPEN
EVESFSEVVKKVMESAIEIDVPLIADVDYGKTWYDAK
NT seq 2634 nt   +upstreamnt  +downstreamnt
ttggctgataaattagtccttgtggacggaaacagtgtcgcttaccgggcattctttgct
ctgcctttgttgaacaatgaaaaaggtgtttatacaaatgccgtttacgggtttacaacg
atgcttttaaaaatattggaagaggaagagccggcccatatgcttatagctttcgacgcc
ggaaaaacaactttccgccatgaaacgtataaagaatataaaggaacacgccagaagaca
ccgccggagctggctgaacagctgccgcttatgcgtgacctggtgaaggcatttaatatc
gcttacgaagaagtggaaaattatgaagcagatgatattatcggaacgctggcgaaacgt
gccgaaaaagaaggatgggaaacaaaaatctttacaggagataaggatctcctgcagctt
gtggatgaaaaaattcatgtagctctgcttcgcaaaggcatcacgaatgtagatacatat
gacctgaaacaacttcaggagaaatacggcttgaagccgtctcagatcatcgatatgaaa
ggactgatgggagacagttccgataatatacccggtgtgccgggcatcggtgagaaaacg
gctcttaaactgctggccgcccacgatacgctcgaaggggtctatgaaaatatagaatct
gtttccggaaagaagatgaaggaaaagctcgttgaaaatgaacagcaggcggtcatgagt
aaaaagctggctacgatcctgactgaagtaccgcttaagatgaccctggaggacctttcc
ctgggagaaagaaacacgcctgccctcctggagctgttccgtgatctggagttttcttcg
cttattgacagaattgatccagacggcggagcggcaggagaagaacagctggaagatgtt
gaggtgcaggtgattgacgacctcgatccatcgatgctcgccactccttccgctcttgtc
attgaatctctggaagaaaattatcacaatgcaacgatcgttggcggagctctggcaaac
gaaaccggagtgtactttctgagtccggaagttctggcaaagagcagcacctttaaagaa
tgggcaaaagatgaatcacaggagaaaattgtctttaacgcaaagcgagcggttgtaggg
ctcgcgtggcaggatatccctctggaaggtgtgatcttcgacggacagatggcgtcttat
ttaattgatccgggggcagcttcccacgaaatggcggatattgccaaacgtaaaaaaggc
atgcaggtgcagcgggatgaaaccgtctacggaaaagggaaaaaaatgcacgttccggaa
gaagcagtacttgcccagcatgtaggacgaaaagcagcggctgtactggaattgaagccg
gatcttgaaaaagagcttcaggaaaatgaacagctggaactcttgacggagcttgaaatg
cccctgtcgattattcttggaagaatggagcgtcatggggtcgcaatcgataaagaggaa
cttgaaaaaataggagaaggtttaacagaaagactgcaggaaatagaaacgaagattcat
gatatggcaggaacggtttttaatatcaattccccaaaacagctcggagaaattttgttt
gaaaaaatggatcttcctcctttgaagaaaacgaaaaccggttattcaacttcggcagat
gttctggaaaaattacaggatcagcatgaaattattccggaaatacttctttaccgtcag
ctgagtaaattgaattccacctatattgaaggtcttattaaagcgattcataataaaact
ggaaaaattcacacgatgtttaaccaggccctgacgcagactggacgtttgagttcaaca
gaaccaaacctgcagaatatcccgatccgactggaagaaggccgcagaatcaggcacgcg
tttgtgccatcgaaagataattcctatattctggctgcagattattctcagattgaactg
agggtgctcgcccacatatcgggagacgaaaatttaattgaagctttccgtcatggcatg
gacattcatacgaaaacggcaatggatgtatttgaggtcgaggaagcaaaagtcacgtcg
gcgatgcgcaggaccgctaaagcggtcaacttcggcatcgtttacgggatcagcgattac
ggtctttcccagagtctcggcatcacgcgtaaacaggcacagagtttcattgacaaatat
ctggaaagttatcccggagtaagtgaatatatggattcaagcattgaagaagcaagggaa
aaaggatatgtgacgacgatgatgaaccggcgccgctaccttcctgagattacgagccgg
aactttaatctgcggagctttgctgaaagaactgcaatgaataccccgattcagggaagc
gctgcagacattattaaaaaagcgatggtagatatggataaagcaatggacaaagaaaaa
acaaaagccgtcatgctgctgcaggttcatgatgaacttatttttgaagtaccggaaaat
gaggttgaatctttttcggaagtggtaaaaaaagtaatggagtcggctatagaaatcgat
gtacctcttattgcggatgtggattatggcaagacgtggtacgatgcgaaatag

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