Alkalicoccus halolimnae: FTX54_015680
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Entry
FTX54_015680 CDS
T09800
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
ahal
Alkalicoccus halolimnae
Pathway
ahal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FTX54_015680 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahal03021
]
FTX54_015680 (rpoE)
03400 DNA repair and recombination proteins [BR:
ahal03400
]
FTX54_015680 (rpoE)
Transcription machinery [BR:
ahal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FTX54_015680 (rpoE)
DNA repair and recombination proteins [BR:
ahal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FTX54_015680 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Type_III_YscX
RecG_N
Motif
Other DBs
NCBI-ProteinID:
WWD79814
UniProt:
A0A5C7FBU1
LinkDB
All DBs
Position
complement(3439236..3439733)
Genome browser
AA seq
165 aa
AA seq
DB search
MSLKDYTEEQLKEISMLDVTFELLDEKNSPEDYGVLIDQVGEIQGLSQERKHERIAHLYT
QMSLDGRFVNLGDNRWALRSWYPFEQTEEELSQMMPKKRKAAKEEEGFDDELEEYDEFED
IEDELDELANEEDTDTDELDEDEFGDTAGEVSEDEKDEEESEEEK
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaaaagattacacagaagaacagctgaaagaaatctccatgcttgatgtgaca
tttgagctgctcgatgaaaagaacagcccggaggactacggagtactgattgatcaggta
ggagaaatccagggtctgagccaggaacgcaaacacgaacgcatcgctcacctctacacg
cagatgtcgctcgatggaagattcgttaatctcggggataaccgctgggcccttcgttcc
tggtatccatttgagcagacagaagaagagctctcccagatgatgcctaaaaaacgaaaa
gctgcaaaagaagaagaaggattcgatgacgagctcgaagaatacgacgagtttgaagac
atcgaagacgaactcgacgagcttgccaacgaagaagataccgacacagacgagcttgat
gaagatgaattcggtgatacagccggagaagtttccgaggatgaaaaagacgaggaagaa
tccgaagaagagaagtaa
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