Alkalicoccus halolimnae: FTX54_016195
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Entry
FTX54_016195 CDS
T09800
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ahal
Alkalicoccus halolimnae
Pathway
ahal02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FTX54_016195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ahal02000
]
FTX54_016195
Transporters [BR:
ahal02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FTX54_016195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_23
AAA
NB-ARC
AAA_16
RsgA_GTPase
TsaE
nSTAND1
nSTAND3
AAA_22
ATPase_2
ORC-CDC6-like
PhoH
AAA_29
Rad17
AAA_14
AAA_5
AAA_28
NACHT
nSTAND_NTPase5
MobB
AAA_30
DEAD
DO-GTPase2
AAA_15
Kelch_FKB95
AAA_19
Mg_chelatase
AAA_25
NPHP3_N
PRK
Motif
Other DBs
NCBI-ProteinID:
WWD79910
UniProt:
A0AAJ8N0J5
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All DBs
Position
complement(3573346..3574290)
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AA seq
314 aa
AA seq
DB search
MLNLIQLEKKFHQETIFQNISAEINEGDIVSIVGPSGCGKTTLLRCIAGLTKMSSGRIEL
HGKDITAEKAEKRPVVLMFQEALLFPHLTVIQNVLYGVKYGKRRLSSKDRENQAQKMLKK
VEMLEWKDKYPSQLSGGQQQRVSLARALMLQPSVLLLDEPFSSLDAHLRQSLRLWVRRFL
KEEGVTALFVTHDREEAVVMGDRLIVMKDGILQQEGIPGEVYSHPANASVAGFMSDGIYV
DGVFYSAASLTMTGAKSGAYKGIIEHPLYAYGYSFYRVYLPELKQSVVIRSDMQWREAEE
TAVTVVQKGSVSSD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaccttattcagctggagaaaaaatttcatcaggagaccatttttcaaaacatc
agcgctgaaataaatgagggggatatagtcagcattgtcgggccctccggctgcgggaaa
acaacccttctccgctgtattgccggattgacgaaaatgagcagcggcaggatcgaactg
catggaaaggacatcactgccgagaaagcagagaaacgtccagttgtgcttatgtttcag
gaagcgctgctgtttccgcatttgaccgtgattcagaacgttctttacggggtgaagtac
ggcaaacgacgcctttcctccaaagatcgggaaaaccaggcacaaaaaatgctgaaaaaa
gtagagatgcttgaatggaaagacaagtatccttcccagctctccggaggtcagcagcag
cgggtatcgctcgcccgggcactgatgctgcagccttccgtcctgctgcttgacgaaccg
ttcagcagccttgacgcgcatctgcgccagtcgctccgcttatgggtgcgccgttttctt
aaagaagaaggggtgacagcgctgtttgtgacacacgacagggaagaagcggttgtcatg
ggggacagactgatcgtcatgaaagacggtattctccagcaggagggaattcccggagaa
gtctattcccaccctgcaaacgcgtcggtcgccgggtttatgagcgacggtatttatgtg
gatggtgtcttttattcggccgcttccttaacgatgacaggcgcaaaaagcggggcgtac
aaaggaattattgaacacccgctgtatgcctatggctattccttctaccgtgtctatctg
cccgagctgaagcagtcggtcgttatccggtccgacatgcagtggcgggaagcagaagaa
acagcggtaaccgttgttcaaaaaggaagtgtgtccagtgattga
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