Alkalicoccus halolimnae: FTX54_016560
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Entry
FTX54_016560 CDS
T09800
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K21467
penicillin-binding protein 3
Organism
ahal
Alkalicoccus halolimnae
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ahal01011
]
FTX54_016560
Peptidoglycan biosynthesis and degradation proteins [BR:
ahal01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FTX54_016560
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
MecA_N
Motif
Other DBs
NCBI-ProteinID:
WWD79981
LinkDB
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Position
3654630..3656660
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AA seq
676 aa
AA seq
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MKRKVTGLLLISAAGLAACSNEDPADPEDTLDAYLESWNSGSYEEMPNYLTASSEQEINS
FDWDFAERYSDIYEALSVTIEDITYEARDFEEEDINLEELEEISYPVTVDMETAAGSLSY
ETEVELEKIVDEEEDTEEWQTTWQPQHLMAGLEEPDEQVAIEREEPVRGEIFDRTGEPLA
VNGEIARVAVVPEAAEDTEEAAAEVASVLDLNEEQTIEAASAYPDNPDWAAPVQDLPTGD
ERIDELLEISGVSVSTVEGREYPYGEVSGALIGYIGAMTAEELEEVDEGYSSTSALGKSG
VELIKEEELRGTTGVEIAIQNEAGETRRIVQSVEAEAGTDVTLTIDIDMQQEMAEIIGED
SGTGVVMNPQNGETLVLASEPSVDSNLRYLGLPDPRAEELETPEILTERRFQRAYSPGSV
WKPFTAVAGLEAGTLDPEEALDIDGARWQPDDSWGGYQVTRVNEDVDSVDLEAAMSYSDN
IYFARQALALGADEMKSWGERFGMEDTFPFDFPLHASQLANEGFDNEILLADSGYGQGEV
ELPPVHLNALYSMFIREGEVAQPMLFEDSEKTSSGVTDSETAGLVRETLINVVEDENGTA
HRPDPGHGRSLAGKTGTAELKSDQTVEDGEQIGWYTSFDYEQEDYVTTMMIQNVEEYGGS
GYVVDLANEFWETLDE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaaagttaccggcttgctgctcatctcagctgcgggtcttgcagcctgttca
aatgaagatccggccgatccggaagacacgcttgatgcgtatctcgaatcttggaacagc
ggctcctatgaagagatgccgaactatctgactgcttcttccgagcaggaaatcaacagt
tttgactgggattttgccgaaagatacagcgatatttatgaagcactttcggtcacaatt
gaagacattacatatgaagcacgcgactttgaagaggaagacatcaacctggaagagctc
gaggaaatcagctaccccgtcactgtagatatggagacagctgcaggctccctttcctat
gaaacggaagtcgaacttgaaaaaatagtggatgaagaagaagatacagaagaatggcag
accacctggcagccgcagcaccttatggccggcctggaagaacccgacgaacaagttgcc
attgaaagggaagaaccggtgcggggagaaatattcgaccgcaccggggaaccgctcgct
gtgaatggtgaaatcgcgcgcgtcgctgtcgttcctgaagcagcagaggacacagaagaa
gcagctgccgaagtcgcttctgtgcttgatcttaacgaagaacagacaatcgaagccgct
tccgcctacccggataaccccgactgggccgctcccgtgcaggatctcccgaccggcgat
gagcggattgacgaactgctcgaaataagcggtgtttcggtcagtactgtcgaagggcgc
gagtacccttacggtgaggtgagcggtgcccttatcggctatattggagctatgacggcc
gaagaacttgaagaagtggatgaaggctacagcagcacatccgctctcggtaaaagcgga
gtagagcttattaaagaagaagagctccgcggcactacaggagtcgagattgccattcaa
aatgaggcaggagaaacgcgtcgcatcgtccagtcggttgaggccgaggcagggaccgat
gttacgctcacaatcgatatcgatatgcagcaggagatggcagaaataataggagaagac
tccggaaccggtgttgtcatgaacccgcagaacggagaaacacttgtgctcgcgagtgaa
ccatcggtggattccaacctccgctacctcggccttcctgatccgcgggctgaagaactg
gagacgcctgaaatacttacagaacgccgctttcagcgtgcctattctcccggatcggta
tggaagcccttcacagctgtagccggcctcgaagcaggaacgctggaccccgaggaggca
ctcgacatagacggtgctcgatggcagcccgatgacagctggggcggctaccaggtcaca
cgtgtaaatgaagatgtggacagcgtggatctggaggcggcgatgagctattcggataat
atctattttgcccggcaggcactcgccttaggggccgatgaaatgaaaagctggggagaa
cgcttcggtatggaagatacttttccgttcgatttcccactccacgcctcccagctggct
aatgaaggattcgataacgaaatccttctcgctgacagcggctacggacagggggaagta
gagcttccgccggtgcacttgaacgctctttattctatgtttatccgggaaggggaggtc
gctcagccgatgctgtttgaagattcagaaaaaacgtcctccggcgtcaccgattctgag
acagccgggctcgtccgcgaaacgttgatcaatgtcgttgaggacgaaaacggcactgct
caccgcccggatcccgggcatggacgctcccttgccggaaaaaccggcacagcagagctg
aagtccgaccagacagtggaagatggggaacaaatcggctggtatacgagctttgactat
gaacaggaagattacgtaacaacgatgatgatccagaacgtggaggagtacggaggcagc
ggctatgtcgtcgatcttgccaacgaattctgggaaacactcgatgaataa
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