Alkalicoccus halolimnae: FTX54_016580
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Entry
FTX54_016580 CDS
T09800
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ahal
Alkalicoccus halolimnae
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahal03400
]
FTX54_016580
Enzymes [BR:
ahal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FTX54_016580
DNA repair and recombination proteins [BR:
ahal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FTX54_016580
Prokaryotic type
FTX54_016580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WWD79985
UniProt:
A0AAJ8N0L9
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All DBs
Position
3660413..3661924
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AA seq
503 aa
AA seq
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MQVVWFKRDLRLGDHRPLTEAVKQGGPVLLLYVMEPSIWQAGDLSKRHARFVYESLSELQ
QEVRKIGGELYTAVGEMEPILEFIYQAAGAFSLYAHEEHGTPHTFSRDRSVRKWMKTRQL
GFYEYPPFGVTRGLGKRSDFPERWKNFMQQSILPVPGRLPPPSPNQLPGNVKASLSPLTR
VEVPGELLRYGQEGGMSQADAALDSFLNSRFVHYQKHISKPLASSTSCSRLSPYLAWGNI
SLRSVYQQTLHRRSSASSYESSQLDQFLSRLHWHCHFIQRLEDEPRLALENMNRAFDSVR
TAWDEELYQKWLTGTTGIPLIDASMRSLHRTGWINFRSRAMLVSFVCNTLLLDWKRPADD
LAKLFLDYEPGIHFSQMQMQAGTTGFNTIRIYNPVKQGKDHDPEGRFIRRYVKELEHVSD
TFIHEPWKDPAFFYSSYPGPVVDVLKANRRAREVLWSVKQSEEGEKQTEKQFAKHSVRRT
ENRKKRDKPAFKQLSLFEEDDFS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtagtctggtttaaacgggatttacggctgggggatcaccggccgctcacagaa
gcagtgaagcagggagggccggtgctgcttctctacgtcatggaaccgagtatatggcag
gcgggcgacctttccaaacggcacgcccgtttcgtatatgaaagcttaagcgagctccag
caggaagtgagaaagatcggaggagaactttacacagcagtcggagaaatggagcccata
cttgaatttatttaccaggccgccggtgctttttcgctctatgcgcatgaggagcatggc
actccgcataccttttcacgtgaccggagtgtccggaaatggatgaagacccgtcagctt
ggtttttatgaatatcctcccttcggtgtcacccgtggactcgggaaacgcagtgatttc
ccggagcggtggaagaattttatgcagcagtctattctgcccgtacccggccgtctgcct
ccaccctctcccaatcagctgcccggaaatgtgaaagcttctctttctcctcttacccgt
gtggaagttcctggtgaactgctccgctatgggcaggaaggagggatgagccaggccgat
gctgcgcttgactcttttttaaacagccgctttgttcattatcaaaaacatatctccaaa
ccgctcgcttcgtcgacttcctgcagccgcctctcaccttatctcgcatggggaaatatt
tcactgcggagcgtctaccagcagacgcttcatagaagaagctctgcttcctcctatgaa
agcagccagctggaccagtttctttcccgtctgcactggcactgtcattttattcagcgt
ctggaggatgagccccgtcttgctcttgagaatatgaatcgtgctttcgacagcgtgcgc
acagcatgggacgaagagctttaccaaaaatggctcaccggcacaaccggcattcccttg
attgatgcttcaatgcgcagcctgcaccgtaccggctggatcaatttccgctcccgggcg
atgctcgtgtctttcgtctgtaatactctgctgctcgactggaaaagacccgcagatgat
ctcgcgaagttgtttctggattatgaaccgggaattcatttcagtcagatgcagatgcag
gccggaacgaccggatttaatacgatccgcatttataatccagttaaacagggaaaggat
catgatccggaaggccgttttatccgcagatatgtaaaagagctggaacacgtttcggat
accttcattcatgagccgtggaaagatccggctttcttctacagcagctatccaggaccg
gtcgttgatgtattgaaagcaaaccgacgtgcaagggaagttctctggtcggttaagcag
tcggaagaaggtgaaaaacagactgagaaacagtttgcaaagcattcggtccgccggacg
gaaaacagaaaaaaaagagacaagcctgcatttaagcagctgtctctattcgaagaggat
gatttctcttag
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