Alkalicoccus halolimnae: FTX54_016675
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Entry
FTX54_016675 CDS
T09800
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
ahal
Alkalicoccus halolimnae
Pathway
ahal03030
DNA replication
ahal03430
Mismatch repair
ahal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FTX54_016675 (ssb)
03430 Mismatch repair
FTX54_016675 (ssb)
03440 Homologous recombination
FTX54_016675 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahal03032
]
FTX54_016675 (ssb)
03400 DNA repair and recombination proteins [BR:
ahal03400
]
FTX54_016675 (ssb)
03029 Mitochondrial biogenesis [BR:
ahal03029
]
FTX54_016675 (ssb)
DNA replication proteins [BR:
ahal03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FTX54_016675 (ssb)
DNA repair and recombination proteins [BR:
ahal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
FTX54_016675 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
FTX54_016675 (ssb)
Mitochondrial biogenesis [BR:
ahal03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
FTX54_016675 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
tRNA_anti-codon
Peptidase_U49
Motif
Other DBs
NCBI-ProteinID:
WWD79999
UniProt:
A0A5C7FKZ7
LinkDB
All DBs
Position
complement(3678213..3678731)
Genome browser
AA seq
172 aa
AA seq
DB search
MINRVVLVGRLTKDPELRYTANGIAVATFTLAVNRPFSNQQGNREADFINTVVWRKQAEN
VANYLKKGSMAGVDGRIQTRSFDNNEGRRIFMTEVVAESVQFLEPRGSSQGGGQQYGDSG
QQAPQGGQSGSTGGQGAGSGSASGGFGQGSSNDDPFAGEGKPIDIDDDDLPF
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgattaaccgcgttgttctagttggacgcttaacgaaagacccggagctgcgttatacg
gcaaacggcattgcagtagcgacatttacgcttgcagtcaaccgtccgttttcaaaccag
cagggcaatcgtgaagctgacttcattaatactgtagtttggagaaagcaggcggaaaac
gtcgccaactacctgaaaaaaggaagcatggccggcgtagacggccgcatccagacccgc
agcttcgataataacgaaggccgtcgtatttttatgacagaagtagtagccgagagcgtt
cagtttctggaaccgcgcgggtcttcccagggcggaggccagcagtacggagattccggc
cagcaggcacctcaagggggccagagcggctccacaggggggcagggcgccggttccgga
tctgcttccggtggtttcggtcaaggttcatccaacgatgatccgtttgccggtgaaggc
aagccgatcgatatcgatgatgacgatcttccgttctaa
DBGET
integrated database retrieval system
