Algoriphagus halophytocola: OM944_01520
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Entry
OM944_01520 CDS
T10580
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ahao Algoriphagus halophytocola
Brite
KEGG Orthology (KO) [BR:
ahao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahao03016
]
OM944_01520 (truB)
Enzymes [BR:
ahao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OM944_01520 (truB)
Transfer RNA biogenesis [BR:
ahao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OM944_01520 (truB)
Prokaryotic type
OM944_01520 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UZD23175
UniProt:
A0ABY6MHB9
LinkDB
All DBs
Position
complement(394713..395393)
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AA seq
226 aa
AA seq
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MQAPYGEVFLINKPLEWTSFDVVKKVRNALKIKKVGHAGTLDPLATGLLIVCAGKMTKQI
DSFMGQEKEYTGTFVIGHTTDSFDLEQPIVPVADPSAVTLEQVKSAVAELTGDILQIPPM
HSAIKVDGKRVYESARKGKEVKMDPRPVQVSVFEITRFEIPEIEFRIVCSKGTYIRSLAR
DLGEKLGVGAYMSSLCRTRIGDFKLSDAKELAPLVEEIKARSHENL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaccatacggagaagtatttctgatcaataaaccgctggagtggacctccttt
gacgtggtgaaaaaggtcaggaatgctttaaaaatcaaaaaggtgggtcatgctggcaca
ttggatcctttggccaccggcctcttgattgtctgcgcaggtaaaatgaccaagcagata
gattcctttatgggccaggaaaaggaatacactggtactttcgtcatcggccacaccaca
gattcttttgacctggaacagcccatagtacccgtagcagatccatctgctgtgactttg
gagcaggtaaaatccgctgtagctgagctcaccggggatatactgcagatccctcccatg
cactcagcgatcaaggtagatggcaaaagggtctacgaatcagctagaaagggaaaggaa
gtaaaaatggatcctcgcccggtacaggtgagtgttttcgaaatcactagatttgaaatc
ccggaaattgaattcagaatcgtttgctccaagggtacctacatcagaagcctggcaaga
gatttgggtgaaaaactaggcgtgggtgcttatatgagttcactttgcagaacgagaata
ggagatttcaaactctcagatgcaaaagaattagctcctttagtagaagaaatcaaagcc
agatcccatgaaaatctatga
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