Algoriphagus halophytocola: OM944_02040
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Entry
OM944_02040 CDS
T10580
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ahao Algoriphagus halophytocola
Brite
KEGG Orthology (KO) [BR:
ahao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahao03032
]
OM944_02040 (gyrB)
03400 DNA repair and recombination proteins [BR:
ahao03400
]
OM944_02040 (gyrB)
Enzymes [BR:
ahao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OM944_02040 (gyrB)
DNA replication proteins [BR:
ahao03032
]
Prokaryotic type
DNA Topoisomerases
OM944_02040 (gyrB)
DNA repair and recombination proteins [BR:
ahao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OM944_02040 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
PdaC
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
UZD23274
UniProt:
A0ABY6MM53
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All DBs
Position
521603..523561
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AA seq
652 aa
AA seq
DB search
MSEEKAKNPAEYGAGNIQVLEGLEAVRKRPAMYIGDVGVKGLHHLIWEVVDNSIDEALAG
HCDTIRVTVNEDNSITVEDNGRGIPTDMHSKEKKSALEVVLTVLHAGGKFDKDTYKVSGG
LHGVGVSCVNALSTDLKATVHRNGVITEQEFKIGVPQYPARQIGKTDSRGTIITFKPDAS
IFTVTEYKYETIANRLREMAFLNAGIRIFLTDLREKEDDGSFKSDEFFSEGGLVEFVEYL
DVSKEKIIETPIYIESEQNGVPVQVAMSYNSSYSENVVSYVNTINTYEGGTHVTGFRRAL
TRTLKSYADKSGMLEKLKMEVSGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSDVVGAV
DSAVSDTLLSWLEEHPKESKIIVGKVILAAQARHAARKAREMVQRKNVLGGGGLPGKLAD
CANSDPTVCELYLVEGDSAGGSAKQGRDRDFQAILPLKGKILNVEKAHEHKIYDNDEIKN
ILTALGVKFGTANDDKELDLTGLRYHKIIIMTDADIDGSHIRTLILTLFFRYMRSLIENG
YVYIALPPLYLLKKGKDERYCWSEDQRKELVAEMAKDGKEDSVGIQRYKGLGEMNPEQLW
TTTMDPEMRTIKQVTIESAAEADHLFSVLMGDEVAPRREFIEKNAKYAKIDT
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaaaaagctaagaatccagcagagtacggcgccggcaacattcaggtatta
gaaggtcttgaggcagttcgtaagagacctgctatgtatattggtgacgtaggagtcaaa
ggacttcatcacctgatctgggaagtggtggataactccatcgatgaagccttggcgggt
cattgtgataccattcgagtgacggtaaatgaggataattccattactgtagaagataat
ggacgaggtattcctacagatatgcactccaaggagaagaagtcagctttggaagtggta
ttgacagttctccacgctggcggtaaattcgataaggatacctataaagtttccggtggg
ctgcacggcgtaggggtgtcttgtgtaaatgcactatctaccgacctcaaagctactgtt
catcgaaatggtgtaatcaccgaacaagaattcaaaatcggtgttcctcagtatcctgcc
agacaaattggtaaaactgatagccgaggcaccattatcaccttcaagccggacgcaagt
atattcacggtcactgaatacaagtacgaaaccatagccaacaggctacgagaaatggca
ttcttgaatgctggtatccgcatatttcttacagatctacgtgaaaaagaagatgatgga
agcttcaagtctgatgagtttttctctgaaggaggcttggtagaatttgtagaatatttg
gatgtcagcaaagagaagatcattgagacacctatttacatagaatctgagcaaaatggg
gttcctgtacaagtggccatgagctacaacagttcctattcagaaaatgtggtgtcctac
gtaaataccatcaatacctacgaaggcggtacacatgtgaccggtttcagaagagcattg
accagaacattgaagtcctatgccgataaatctggaatgctggagaagctgaaaatggaa
gtgtccggggatgattttcgtgaagggttgactgcggtgatttccgtgaaggtggctgag
cctcagtttgaaggtcagaccaaaactaaactgggtaactctgatgtagtcggtgcagtg
gattctgctgtttcagacaccctgctttcttggctggaagagcaccctaaagaatcaaaa
atcattgtaggaaaagtgattttagctgctcaggcaagacatgcagcccgcaaggcccgt
gaaatggtgcagcgtaaaaatgtacttggaggcggtggcctgccgggaaaacttgccgac
tgtgcaaatagtgatcctacggtttgtgaattgtacctggtggaaggggactccgcagga
ggttctgccaagcaaggaagagatcgtgattttcaggcgattttgcccttgaaaggaaaa
atcctaaacgtagaaaaagcacatgagcataaaatctacgataatgatgagatcaaaaat
atactgacagcgctaggagttaaatttggtactgccaatgatgacaaagaactagacctt
accggacttcgctatcataaaatcatcatcatgacggatgccgatattgacggatctcac
attcgtaccttgattttgaccctgtttttcagatacatgcgcagcttgatcgaaaatggc
tatgtctatatcgcacttcctcctttgtatttgctgaaaaaaggtaaagacgagcgctat
tgctggtccgaagatcaacgtaaggaactagtggcagaaatggccaaagacggcaaggaa
gacagtgtcgggatacagcgatacaagggtcttggtgagatgaacccagagcagctttgg
actacaaccatggatccggagatgcgtaccatcaagcaagtgaccattgaatcggccgct
gaagctgatcatctcttcagtgtactgatgggagatgaagtcgccccacgacgagaattt
atcgagaaaaacgctaaatacgccaaaatcgatacttga
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