Algoriphagus halophytocola: OM944_03210
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Entry
OM944_03210 CDS
T10580
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ahao Algoriphagus halophytocola
Pathway
ahao02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ahao00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OM944_03210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahao03021
]
OM944_03210
Transcription machinery [BR:
ahao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OM944_03210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
UPF0122
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UZD23502
UniProt:
A0ABY6MI77
LinkDB
All DBs
Position
complement(799669..800532)
Genome browser
AA seq
287 aa
AA seq
DB search
MRQLKISKQITNRESQSLDKYLQEIGKVDLLTADEEVVLAKRIREGDQLALEKLTKANLR
FVVSVAKQYQNQGLSLGDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNRVGSLNKISKTFSELEQKFEREPSPEELAEVLEVTANEVVDTMKISGRHV
SMDAPFVQGEENSLLDVLENDGDEKPDDGLMNDSLRREVQRALSTLTQREADVITLYFGL
NGEHAMTLEEIGEKFNLTRERVRQIKEKAIRRLRHTSRSKTLKPYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagctaaaaattagcaaacagattaccaacagagaaagccagtcccttgataaa
taccttcaagagataggaaaggtagacctgttgacagcagatgaagaagtagttttggct
aagagaattagagaaggtgaccagttggcccttgaaaaactcaccaaagccaaccttcgt
tttgtagtatcagttgccaagcaataccaaaatcaaggactttccttgggagatttgatc
aatgaaggtaatctaggattgatcaaagctgcgcagcgatttgatgagactcgtgggttt
aaatttatctcctatgcagtatggtggatcagacaatccatccttcaggcactagccgag
caatccagaattgtacgtcttccgctgaacagagtaggatccttgaataaaatcagcaaa
acatttagcgaattagagcaaaaattcgagcgtgagccatctccagaggaacttgcagaa
gtgcttgaggtgactgctaatgaagtagtggacaccatgaagatttctggccgtcacgtc
tccatggatgctccatttgtccaaggtgaagaaaatagccttttggatgttttggaaaat
gatggggatgaaaagccagatgatgggctaatgaatgattctcttcgtagagaagtacag
cgcgcactatctaccttgacccaacgtgaagcggatgtaatcacactttactttggcttg
aatggggagcacgcgatgaccttggaagaaataggagaaaaattcaacctaaccagagaa
cgggtaaggcaaatcaaagaaaaggccattcgtcgacttagacacacatctaggagtaag
acgctgaaaccttaccttggatag
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