Algoriphagus halophytocola: OM944_03570
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Entry
OM944_03570 CDS
T10580
Name
(GenBank) Y4yA family PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ahao Algoriphagus halophytocola
Pathway
ahao00300
Lysine biosynthesis
ahao00470
D-Amino acid metabolism
ahao01100
Metabolic pathways
ahao01110
Biosynthesis of secondary metabolites
ahao01120
Microbial metabolism in diverse environments
ahao01230
Biosynthesis of amino acids
Module
ahao_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ahao00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OM944_03570
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OM944_03570
Enzymes [BR:
ahao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
OM944_03570
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
UZD23572
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Position
complement(884126..885553)
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AA seq
475 aa
AA seq
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MNHLPKLSPKVAPWINELEAQPQLLHRLLEKYGSPVNIHFPKSMEENYRDFQQVFDEYSI
KHQVFFARKANKSKNLVEQAHSLGMGIDTASLGELKDCLQMGIAAEKLVVTAAVKNRELI
RLAVENQVLIVLDNADECELAQEVARELDLHVNVAFRISGFEVKGKKLYSRFGFDVEKIS
EFILRYLLRKKRFDCLKYKGLHFHLNGYSTQERALAISHCLDIAKELKPHGLVTEFVDIG
GGFLVNYLESQEEWVHFRAELEKAVLGNRAEITFENNGLGLSKVNHELHGELKIYPFWNS
KSKGAFLKAILSAETSQGNMLSERILKSGIEVRMEPGRSLLDQVGVTVARVAFRKNDSRN
DWLVGLEMNMTQLLSGSADFLLDPILLYQNPDVVKDQEVAVYFTGAYCLERDVILKRKIA
LPKLPEVGDLVIFVNTAGYMMHFFESSAHLFPLAENLYWNRKQDRVEFADFQTDL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacttacctaaactaagtcccaaagtcgcaccctggataaatgagctggaagct
caacctcagcttcttcaccggcttttggagaaatatggttcacctgtgaatatccatttc
ccaaaatccatggaggagaattaccgggattttcaacaggtgtttgatgaatacagcatt
aagcatcaggtgttttttgccagaaaggccaataaatcaaaaaacctggtggagcaagcc
catagtctaggaatgggtatagatacggccagtttgggagagttgaaagactgcttgcag
atggggatagcagctgagaaactggtagtcacggctgcagtaaaaaaccgggaattgatt
cgcctagctgtggaaaatcaggtcttgattgttttggacaatgctgatgaatgcgaattg
gcgcaagaggtagcccgggagcttgatctacatgtcaatgtggcctttcgcatcagtgga
tttgaggtaaaaggtaaaaagttatatagcagatttggttttgatgtagaaaaaatcagc
gagtttattctcaggtatttacttcggaagaagcgatttgactgtctgaaatataagggg
ttacactttcacctgaacggctattctactcaggaaagagccctggctattagtcattgt
ctggatattgcgaaggagctaaaaccgcatggtttggttacggaattcgtagatattggg
ggaggttttctagtgaactatttggaaagccaggaggaatgggtgcattttcgggctgaa
ctggaaaaggctgttttaggcaatagagccgagatcaccttcgaaaataacggcctgggg
ctctctaaagtaaaccatgagttgcatggagagttaaagatctatccattttggaactca
aaatcaaaaggtgcttttttgaaagcaatactatctgctgagaccagtcaaggaaacatg
ctctccgaacggatactaaaatccgggattgaagtcaggatggagcctggaagatcactg
ctagaccaggtgggagttactgtagccagggttgcatttaggaagaatgattcccgcaat
gactggctggtgggcttggaaatgaacatgactcagttgctcagcggaagtgccgatttt
ttgctggaccccatacttttataccaaaatccggatgtagtgaaagaccaggaggtggct
gtatattttactggagcttattgtctagaacgagatgtgattctaaaacgaaaaatagca
ctcccgaaacttcctgaagtaggagatttggtgatctttgtcaatacagctgggtacatg
atgcatttctttgaatccagtgcgcatctgtttccattggcggagaatttatattggaat
agaaaacaggatagggttgaatttgctgattttcagacagatttatga
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