Algoriphagus halophytocola: OM944_04505
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Entry
OM944_04505 CDS
T10580
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ahao Algoriphagus halophytocola
Pathway
ahao03030
DNA replication
ahao03430
Mismatch repair
ahao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OM944_04505
03430 Mismatch repair
OM944_04505
03440 Homologous recombination
OM944_04505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahao03032
]
OM944_04505
03400 DNA repair and recombination proteins [BR:
ahao03400
]
OM944_04505
Enzymes [BR:
ahao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OM944_04505
DNA replication proteins [BR:
ahao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OM944_04505
DNA repair and recombination proteins [BR:
ahao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OM944_04505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
UZD23754
UniProt:
A0ABY6MNH0
LinkDB
All DBs
Position
complement(1107962..1109332)
Genome browser
AA seq
456 aa
AA seq
DB search
MEFAIVDIETTGGGPQTGGITEVAVLIHDGENIIEEYQTLINPLQAIPTYITGLTGIDNA
MVRDEPTFQQVSEKLWELLDGRIFVAHNVNFDYSFLREAFLNHGLYFKAQKLCTVRLSRK
AFPGLRSYSLGRLCESQRIPIEARHRAMGDARATAILFDRIIKQDFQVVNQALKKNKGQA
FLPPNFPIYRFKEIPESCGVYYMLDENGKTIYVGKAINIRERFKNHFSGELLPHLKQKLK
AEVVDLKWALTGTEFMALLFEALEIKRLWPKYNSALKIPKRMFGLYHYEDNSGYGRLQVS
KPNKFFKPLESFFSMEEATAFIKEGIQAYGLCPKLCGLRKVNCGENDPMGCDGACHYSEA
PKSYNQRLNAFLIKIKESQKEILIRLNGRKEGELACCVFERGMLSKFGYVSASLSDEEAL
SELAVVNLLPETYYILRQFIHRLSPEQIMVLDGQRA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgccatagtagatatagaaaccacagggggaggacctcaaaccggaggcata
acagaggtagcagtgctgatccatgatggagaaaatatcattgaggagtatcagacgctg
atcaaccctctacaggctatcccgacctatatcaccggtttgaccggaattgacaatgcc
atggtgcgggatgagccaacctttcagcaggtgagtgaaaagctctgggaattgcttgat
gggaggatttttgtggcgcataatgtcaattttgattacagttttctccgggaggccttt
ttaaatcatgggctgtattttaaagcccaaaagctttgtaccgtcaggctgagcagaaaa
gcctttccgggtttgaggtcatacagcttaggaaggctttgcgaaagccaaagaatcccg
atagaagccagacaccgtgctatgggagatgctagagctaccgccattctttttgaccgg
atcatcaagcaggattttcaagtggtgaatcaggcacttaagaagaataagggtcaggca
tttttaccacccaatttccccatatacagatttaaagaaatcccggaaagctgcggcgtg
tattatatgctggatgaaaacggtaagaccatttatgtaggcaaagcaatcaatatccgc
gagaggttcaaaaatcacttttctggagagctcctgccacatctcaagcaaaaactcaag
gcagaagtggtagacctgaaatgggcgttaaccggaactgaatttatggccttgctattt
gaggcattggaaatcaaaagattatggccgaaatataactccgccttaaaaatcccgaaa
cggatgttcggcttgtaccattacgaggataattccgggtatggaaggttgcaggtatcc
aagcccaataagttttttaagccgctagaatcatttttctccatggaagaagcgactgct
tttattaaggaaggaattcaggcttatggactttgtcccaaactgtgtggattgagaaag
gtgaattgtggggaaaatgatcctatgggatgtgatggtgcctgtcattattcggaagcg
cccaagtcgtataatcagcgactgaacgcgtttttgatcaaaataaaggagagtcagaag
gagattttgattcgattgaatggcagaaaagagggagagcttgcatgctgcgtttttgag
agaggaatgctgagtaagtttggttacgtgtccgcatccttgtctgatgaagaagcactg
agcgaattggcggtagtcaacttgctacctgagacctattacattttaaggcaatttatc
cataggctaagtcctgaacaaatcatggttttagatggacaaagggcttaa
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