Algoriphagus halophytocola: OM944_04655
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Entry
OM944_04655 CDS
T10580
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ahao Algoriphagus halophytocola
Pathway
ahao03030
DNA replication
ahao03430
Mismatch repair
ahao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OM944_04655 (holA)
03430 Mismatch repair
OM944_04655 (holA)
03440 Homologous recombination
OM944_04655 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahao03032
]
OM944_04655 (holA)
03400 DNA repair and recombination proteins [BR:
ahao03400
]
OM944_04655 (holA)
Enzymes [BR:
ahao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OM944_04655 (holA)
DNA replication proteins [BR:
ahao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OM944_04655 (holA)
DNA repair and recombination proteins [BR:
ahao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OM944_04655 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
DUF5844
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
UZD23784
UniProt:
A0ABY6MNK4
LinkDB
All DBs
Position
complement(1144397..1145425)
Genome browser
AA seq
342 aa
AA seq
DB search
MPQTPQTVLKDLKAKKFAPIYFLDGEEPFFIDQITDYIEKNAIPEHERGFNQVVLYGKDA
NVGLILNNARKFPMMAERQVVIVKEAQSLADLSKDESQQLLISYLENPLPSTILVFAHKY
KKLDGRMALGKVLDKKAVYVRSDKVKDFKLIEWVEGYIKDTGHTIDRQSAQLLADSIGNN
LEVLTNEIGKMLINFQEPTKITSEHISKYVGIHKDYNNFEFMKAIGFKDVMKANKIINYF
IQNPKAHPVIPMFSLMYNYFTKIALIHQAQRNNSSEGQLASILKLPPFVVKEYVAASRNY
KLGKVIEVFGYIKEADLRFKGVDSGSLSEAENLRELVYKIMH
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaacgccacaaactgtacttaaggatctgaaagcgaaaaagtttgcgcccatt
tacttcttagatggagaggaaccttttttcattgaccagattacggattatatagagaag
aatgccatccctgagcatgagcggggattcaatcaagtggtgctatatggaaaagatgcc
aatgtgggtctgatcctgaacaatgcccgcaaattccccatgatggcggagcggcaggtg
gtgatcgtgaaggaggcccaaagcctggcagacctcagcaaagatgaatctcagcagctt
ctgattagctatctggaaaatccactgcctagtaccattttggtttttgcgcataaatac
aaaaagctggacggcaggatggctctgggaaaggtgctggataaaaaagccgtctatgta
agatctgataaggtcaaagattttaaactgattgagtgggtagaaggctatattaaggat
accgggcatactattgataggcagtcagcccagcttctagctgattctataggaaataac
ctggaagtactgaccaatgagatcggtaaaatgctgatcaattttcaggaacctacaaaa
atcaccagtgagcatatttcgaaatatgtggggattcacaaggactacaataatttcgaa
ttcatgaaagccataggtttcaaagacgtgatgaaggcgaataaaatcataaattatttc
atccagaatcccaaagcccatccggtgattcccatgttttccttgatgtataattatttc
accaaaatagccttgatccatcaggcacaacgaaataatagttcggaagggcagttggca
agtattctgaagcttcctccttttgtggtaaaagaatatgtggcggcatctagaaactac
aaattgggcaaggtaattgaggtgtttggatacatcaaagaggctgatcttcgttttaaa
ggagttgactccggaagtttaagcgaagcagaaaacctccgcgagcttgtttacaagatt
atgcactga
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