KEGG   Algoriphagus halophytocola: OM944_11390
Entry
OM944_11390       CDS       T10580                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ahao  Algoriphagus halophytocola
Pathway
ahao03030  DNA replication
ahao03430  Mismatch repair
ahao03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ahao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OM944_11390
   03430 Mismatch repair
    OM944_11390
   03440 Homologous recombination
    OM944_11390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ahao03032]
    OM944_11390
   03400 DNA repair and recombination proteins [BR:ahao03400]
    OM944_11390
Enzymes [BR:ahao01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     OM944_11390
DNA replication proteins [BR:ahao03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     OM944_11390
DNA repair and recombination proteins [BR:ahao03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     OM944_11390
SSDB
Motif
Pfam: RNase_T DEDDh_C DNA_pol_A_exo1 RNase_H_2 DNApol_Exo Trp_Tyr_perm
Other DBs
NCBI-ProteinID: UZD21274
UniProt: A0ABY6MD45
LinkDB
Position
2788098..2788769
AA seq 223 aa
MTWWPFSKPKPEPQDFVKKYLERNKAQIPGIRTLDQLSFIVLDTETTGLDTKKDSVLSFG
AVKIAQKRILINSAVEWYPEMFQALNQSPLIHGMVERSNQISTSTFVKRLLEYFSGDILV
GHHLGFDLAMLQKLSAPFGLDQFKNPTLDTMSLAVRLDHGPTVNLNHVQVKNYSLDALCE
RHQIPLDDRHTAAGDAHLTALLLLKLLKIAAAKGIVSYAQLLR
NT seq 672 nt   +upstreamnt  +downstreamnt
atgacttggtggccattttcaaaacccaaacccgaacctcaggattttgtcaaaaaatac
ctagagcgaaataaggctcaaataccgggtattcggaccttagatcagctaagctttatc
gttttagatactgaaactactggactggacaccaaaaaagactccgtgctttcctttggg
gcagtgaaaattgcacagaagcgcatcctgattaattcggccgtagaatggtatccggaa
atgtttcaggcactaaatcaatctcccttgatccacggaatggtggagcgtagtaatcag
atctccacgtccacatttgtcaaaaggctactcgaatacttctccggcgacattctggtg
ggacatcatcttggttttgatctggctatgctacaaaagctcagcgcaccgtttgggctg
gatcaattcaaaaaccccacgctcgacaccatgagtcttgcggtgaggctggaccatggc
cccacagtaaatctcaatcatgtacaggtcaaaaattacagtttagacgccctgtgtgaa
cgtcaccaaatccccttggatgatcggcatactgctgcgggagatgctcaccttaccgcc
ttattactattaaaattactgaaaatagcagcagccaaaggcattgtgtcctacgctcaa
ctcctccgctag

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