Algoriphagus halophytocola: OM944_11390
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Entry
OM944_11390 CDS
T10580
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ahao Algoriphagus halophytocola
Pathway
ahao03030
DNA replication
ahao03430
Mismatch repair
ahao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OM944_11390
03430 Mismatch repair
OM944_11390
03440 Homologous recombination
OM944_11390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahao03032
]
OM944_11390
03400 DNA repair and recombination proteins [BR:
ahao03400
]
OM944_11390
Enzymes [BR:
ahao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OM944_11390
DNA replication proteins [BR:
ahao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OM944_11390
DNA repair and recombination proteins [BR:
ahao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OM944_11390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
DNApol_Exo
Trp_Tyr_perm
Motif
Other DBs
NCBI-ProteinID:
UZD21274
UniProt:
A0ABY6MD45
LinkDB
All DBs
Position
2788098..2788769
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AA seq
223 aa
AA seq
DB search
MTWWPFSKPKPEPQDFVKKYLERNKAQIPGIRTLDQLSFIVLDTETTGLDTKKDSVLSFG
AVKIAQKRILINSAVEWYPEMFQALNQSPLIHGMVERSNQISTSTFVKRLLEYFSGDILV
GHHLGFDLAMLQKLSAPFGLDQFKNPTLDTMSLAVRLDHGPTVNLNHVQVKNYSLDALCE
RHQIPLDDRHTAAGDAHLTALLLLKLLKIAAAKGIVSYAQLLR
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgacttggtggccattttcaaaacccaaacccgaacctcaggattttgtcaaaaaatac
ctagagcgaaataaggctcaaataccgggtattcggaccttagatcagctaagctttatc
gttttagatactgaaactactggactggacaccaaaaaagactccgtgctttcctttggg
gcagtgaaaattgcacagaagcgcatcctgattaattcggccgtagaatggtatccggaa
atgtttcaggcactaaatcaatctcccttgatccacggaatggtggagcgtagtaatcag
atctccacgtccacatttgtcaaaaggctactcgaatacttctccggcgacattctggtg
ggacatcatcttggttttgatctggctatgctacaaaagctcagcgcaccgtttgggctg
gatcaattcaaaaaccccacgctcgacaccatgagtcttgcggtgaggctggaccatggc
cccacagtaaatctcaatcatgtacaggtcaaaaattacagtttagacgccctgtgtgaa
cgtcaccaaatccccttggatgatcggcatactgctgcgggagatgctcaccttaccgcc
ttattactattaaaattactgaaaatagcagcagccaaaggcattgtgtcctacgctcaa
ctcctccgctag
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