Algoriphagus halophytocola: OM944_12310
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Entry
OM944_12310 CDS
T10580
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ahao Algoriphagus halophytocola
Brite
KEGG Orthology (KO) [BR:
ahao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahao03019
]
OM944_12310
03009 Ribosome biogenesis [BR:
ahao03009
]
OM944_12310
Messenger RNA biogenesis [BR:
ahao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OM944_12310
Ribosome biogenesis [BR:
ahao03009
]
Prokaryotic type
rRNA processing factors
OM944_12310
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GFIT
Motif
Pfam:
RNase_E_G
S1
DnaJ_CXXCXGXG
RNase_E_G_Thio
DUF5351
Motif
Other DBs
NCBI-ProteinID:
UZD21445
UniProt:
A0ABY6MET7
LinkDB
All DBs
Position
complement(3019587..3021158)
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AA seq
523 aa
AA seq
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MSTELLIDSAQNGSRIALLQDKSLVELHSEGMDNQFKVGDIYLGTVRKIVNGLNAAFIDV
GYEKDAFLHYQDLGPNFNSLTKFTKMVRNNNYGNYNLKGFDNEPEIEKIGKISGPLSKNQ
QILVQVVKEPISTKGPRLSCELSLPGRYLVLVPFSDSVNVSKKIRSNEERKRLLRLIKSI
KPANFGVIIRTVAEGQSVSDLDKDLRNLLTNWEEGMAKLLKAKSRDKIIGEMSMASSLVR
DLLNESFDAITVEEESTYDQIRSYIRNIAPEKEKIVRLYNGKAKLFENFGIEKQIKSLFG
QTVSLPQGGYVIIEHTEALHVIDVNSGNKSNQESDQESTALKTNLVAAKEIARQLRLRDM
GGIIVVDFIDMKKADNKKAIYEAMKNELQSDRSKHTVLPLSKFGLMQITRQRVRPEVNIV
TKETCPSCNGTGKIQASILVADKLEKDLEHIATIQNVSKIQIGLHPYLHAYFTTGIISRR
VKWFFKYNKWIKLIKDSSLPVTEYRFLDESGEEIELQVKSETE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
ttgagtacggaattgttaatcgattctgctcaaaacggaagtcgaattgcccttttacaa
gataaaagcctggttgagttgcattccgaaggaatggacaatcagttcaaagtgggggat
atttacctgggtacagtccgcaaaatcgtcaatgggctcaatgcagcattcatagacgta
gggtatgagaaagacgcctttctccattaccaggacctcgggccgaatttcaacagcttg
acgaagttcaccaaaatggtgcgcaacaataactacggcaattataacctgaaggggttt
gacaacgaacctgaaatagagaagattggaaagatatccggtccactctccaaaaaccaa
caaatattggtgcaggtcgtcaaagaacccatttctaccaaaggacctcgactatcctgt
gagctctctctgccaggtcgataccttgtgctggtacccttctcggattcggtaaacgtc
tccaagaagatccgtagcaacgaggaaagaaaaagacttttaaggctaatcaaatcaatc
aagcctgccaatttcggtgttatcatccggacagtggctgaagggcaatccgtgagtgat
ctggataaagaccttcgcaacctcctgaccaactgggaagaaggcatggccaaattgctg
aaagccaaaagtcgcgacaagataatcggagagatgagtatggcttcatcactagtgaga
gacctgctcaacgaatcattcgacgcaatcaccgtagaagaagaatctacctacgatcag
atcagatcctacatcaggaacatcgctcctgaaaaagaaaaaattgtcaggctttacaac
ggtaaggccaagctatttgaaaattttggaattgaaaagcagatcaaaagcctgtttgga
cagacggtaagcctccctcaaggaggatacgtgatcatcgagcacaccgaagcccttcac
gtcatagatgtgaacagtggcaacaaatccaatcaggaaagtgaccaagaatcgacagca
ttaaaaacaaacttggtcgccgctaaagaaattgccagacagctgcgcctccgggatatg
ggaggcatcatcgtcgtagacttcatcgatatgaagaaggccgataacaagaaagccatc
tacgaagcgatgaaaaatgagcttcagtctgacaggtctaagcatactgttttgccgctg
agcaaatttgggctcatgcagatcactagacagcgagtaaggccagaggtcaacattgtg
accaaagaaacctgcccatcctgtaacggaacgggcaaaatccaggcttctatcctggtg
gccgataagctggaaaaagacctggagcatattgctaccatccagaatgtgagtaaaatc
caaattgggctgcatccctacctgcacgcatacttcactacaggcattatcagccgaaga
gtaaagtggtttttcaagtataataagtggattaaactgatcaaagattcttcactacca
gtgacggaatacaggttcctagatgaatctggagaagaaatagaactacaagtaaaaagc
gagactgaatag
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